RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
TRAV18-201ENST00000390446 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
TRAV18-201ENST00000390446 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
TRAV18-201ENST00000390446 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 HMMRO75330 724 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 ATP5JP18859 108 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 PTPN5P54829 565 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 GPM6BQ13491 265 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 PPP4R3BQ5MIZ7 849 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 ADHFE1Q8IWW8 467 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
TRAV18-201ENST00000390446 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 C7orf31Q8N865 590 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 COPS5Q92905 334 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
TRAV18-201ENST00000390446 POP1Q99575 1024 aaKnown RBP11.53□□□□□ -0.56
TRAV18-201ENST00000390446 HAUS7Q99871 368 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
TRAV18-201ENST00000390446 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.56
TRAV18-201ENST00000390446 IGKV6D-41A0A0C4DH26 115 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 ZP2Q05996 745 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 CLUL1Q15846 466 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 ANKS1AQ92625 1134 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 PABPC5Q96DU9 382 aaKnown RBP11.52□□□□□ -0.57
TRAV18-201ENST00000390446 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 YME1L1Q96TA2 773 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 PHOX2BQ99453 314 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 PRRX2Q99811 253 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 ALG1Q9BT22 464 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 NACAP1Q9BZK3 213 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 MUTYHQ9UIF7 546 aa11.52□□□□□ -0.57
TRAV18-201ENST00000390446 A6NJR5 290 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 RAB11FIP3O75154 756 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 UPP2O95045 317 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 ICAM1P05362 532 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 CKBP12277 381 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 GNAT2P19087 354 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
TRAV18-201ENST00000390446 IRS1P35568 1242 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 EPC2Q52LR7 807 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
TRAV18-201ENST00000390446 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
TRAV18-201ENST00000390446 NSUN3Q9H649 340 aaKnown RBP11.51□□□□□ -0.57
TRAV18-201ENST00000390446 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 RBM47A0AV96 593 aaKnown RBP11.5□□□□□ -0.57
TRAV18-201ENST00000390446 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 NCK2O43639 380 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 GFRA3O60609 400 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 NBNO60934 754 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 SLC16A2P36021 539 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 FOXK2Q01167 660 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
TRAV18-201ENST00000390446 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
TRAV18-201ENST00000390446 AFG1LQ8WV93 481 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 IGFLR1Q9H665 355 aa11.5□□□□□ -0.57
TRAV18-201ENST00000390446 MYH4Q9Y623 1939 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 STXBP3O00186 592 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 NFIBO00712 420 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 PLA2G6O60733 806 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 LGR5O75473 907 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 CSPG5O95196 566 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 GH1P01241 217 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 PKN1Q16512 942 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAV18-201ENST00000390446 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 EDAQ92838 391 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 ATOH1Q92858 354 aaPredicted RBP11.49□□□□□ -0.57
TRAV18-201ENST00000390446 NAPBQ9H115 298 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 CHD9Q3L8U1 2897 aa11.49□□□□□ -0.57
TRAV18-201ENST00000390446 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
TRAV18-201ENST00000390446 H3BNC9 293 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 M0R296 226 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 RNF113AO15541 343 aaKnown RBP11.48□□□□□ -0.57
TRAV18-201ENST00000390446 GPAA1O43292 621 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 CXCL10P02778 98 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 RLBP1P12271 317 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 THPOP40225 353 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 PTK7Q13308 1070 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 DGKDQ16760 1214 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 ZNF618Q5T7W0 954 aa11.48□□□□□ -0.57
TRAV18-201ENST00000390446 IER5LQ5T953 404 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms