RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 CAGE1Q8TC20 777 aa11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 VWCEQ96DN2 955 aa11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 GPCPD1Q9NPB8 672 aa11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 LMCD1Q9NZU5 365 aa11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAV13-2-201ENST00000390439 NFIBO00712 420 aa11.43□□□□□ -0.58
TRAV13-2-201ENST00000390439 ORC4O43929 436 aa11.43□□□□□ -0.58
TRAV13-2-201ENST00000390439 TTBK2Q6IQ55 1244 aa11.43□□□□□ -0.58
TRAV13-2-201ENST00000390439 LRFN3Q9BTN0 628 aa11.43□□□□□ -0.58
TRAV13-2-201ENST00000390439 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
TRAV13-2-201ENST00000390439 EFCAB14O75071 495 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 NOVP48745 357 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 GRB10Q13322 594 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 PTGISQ16647 500 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 MIER1Q8N108 512 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 MAF1Q9H063 256 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
TRAV13-2-201ENST00000390439 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 GPR37L1O60883 481 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 SELPP16109 830 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 EDNRBP24530 442 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 ALX1Q15699 326 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 KRT40Q6A162 431 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 CNKSR3Q6P9H4 555 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 SLC30A10Q6XR72 485 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 CLEC4DQ8WXI8 215 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 TTC14Q96N46 770 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 RAD9AQ99638 391 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
TRAV13-2-201ENST00000390439 WDR19Q8NEZ3 1342 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 ABHD14A-ACY1A0A1B0GW23 586 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 GH1P01241 217 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 FGRP09769 529 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 MX1P20591 662 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 WDR5P61964 334 aaKnown RBP11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 DGKDQ16760 1214 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 C20orf194Q5TEA3 1177 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 AFG1LQ8WV93 481 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 COPS5Q92905 334 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 HELLSQ9NRZ9 838 aa11.4□□□□□ -0.58
TRAV13-2-201ENST00000390439 PIEZO1Q92508 2521 aa11.4□□□□□ -0.59
TRAV13-2-201ENST00000390439 PDHBP11177 359 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 PCP11498 1178 aaKnown RBP11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 IKBKEQ14164 716 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 STXBP2Q15833 593 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 MCF2L2Q86YR7 1114 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 C7orf31Q8N865 590 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 GBF1Q92538 1859 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 EVI5LQ96CN4 794 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 KATNAL1Q9BW62 490 aa11.39□□□□□ -0.59
TRAV13-2-201ENST00000390439 PI4K2BG5E9Z4 385 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 LPXNO60711 386 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 FGAP02671 866 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 MMP3P08254 477 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 ERVK-21P61565 698 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 USH1GQ495M9 461 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 GDF6Q6KF10 455 aaPredicted RBP11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 MFSD6Q6ZSS7 791 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 SEPT14Q6ZU15 432 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 TICAM2Q86XR7 235 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 GDPD5Q8WTR4 605 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 CTNNA3Q9UI47 895 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 LRRC37A2A6NM11 1700 aa11.38□□□□□ -0.59
TRAV13-2-201ENST00000390439 SCN10AQ9Y5Y9 1956 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 FOXP2O15409 715 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 GJB5O95377 273 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 CXCL10P02778 98 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 CKBP12277 381 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 RBL2Q08999 1139 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 PTK7Q13308 1070 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 LY6KQ17RY6 165 aa11.37□□□□□ -0.59
TRAV13-2-201ENST00000390439 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms