RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 SMARCA1P28370 1054 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 HSPA4P34932 840 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 NKX3-2P78367 333 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
TRBV27-201ENST00000390399 GHRHRQ02643 423 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 FSCN1Q16658 493 aaKnown RBP10.36□□□□□ -0.75
TRBV27-201ENST00000390399 TMEM63BQ5T3F8 832 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 SCFD2Q8WU76 684 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 KCNB2Q92953 911 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 JAKMIP1Q96N16 626 aaKnown RBP10.36□□□□□ -0.75
TRBV27-201ENST00000390399 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 GDF15Q99988 308 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
TRBV27-201ENST00000390399 PCDH10Q9P2E7 1040 aa10.36□□□□□ -0.75
TRBV27-201ENST00000390399 SEC63Q9UGP8 760 aaKnown RBP10.36□□□□□ -0.75
TRBV27-201ENST00000390399 ELP1O95163 1332 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 A0A1W2PPC1 479 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 GCOM1H8Y6P7 765 aaPredicted RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 POLR2MP0CAP2 368 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 BMP8BP34820 402 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 FGD1P98174 961 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 TLE2Q04725 743 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 STXBP2Q15833 593 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 APOA5Q6Q788 366 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 TMTC3Q6ZXV5 915 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 SRBD1Q8N5C6 995 aaKnown RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 FANCBQ8NB91 859 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 OR6J1Q8NGC5 347 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 LBHD1Q9BQE6 289 aaPredicted RBP10.35□□□□□ -0.75
TRBV27-201ENST00000390399 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 PXMP2Q9NR77 195 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 SNX14Q9Y5W7 946 aa10.35□□□□□ -0.75
TRBV27-201ENST00000390399 MROH7Q68CQ1 1323 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 KLF18A0A0U1RQI7 1052 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 ZBTB43O43298 467 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CABYRO75952 493 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 NR3C2P08235 984 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CLTBP09497 229 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 TXNP10599 105 aaKnown RBP10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CPA1P15085 419 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CPT1AP50416 773 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 RTN1Q16799 776 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 PDCD2LQ9BRP1 358 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 UBE2OQ9C0C9 1292 aaKnown RBP10.34□□□□□ -0.75
TRBV27-201ENST00000390399 RBM28Q9NW13 759 aaKnown RBP10.34□□□□□ -0.75
TRBV27-201ENST00000390399 BRPF3Q9ULD4 1205 aa10.34□□□□□ -0.75
TRBV27-201ENST00000390399 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 TRIM43BA6NCK2 446 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 GOLGA8AA7E2F4 631 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 GOLGA8BA8MQT2 603 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 ARVCFO00192 962 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 EPB41L2O43491 1005 aaKnown RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 EIF3JO75822 258 aaKnown RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 ARIH2O95376 493 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 MYCLP12524 364 aaPredicted RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 PSMA5P28066 241 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 FXR1P51114 621 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 PGM5Q15124 567 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 Q6ZUG5 572 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 ANKRD33Q7Z3H0 272 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 SH3RF1Q7Z6J0 888 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 COPS5Q92905 334 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 CUL5Q93034 780 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 TRIM43Q96BQ3 446 aaPredicted RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 TOX2Q96NM4 488 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 POLR3EQ9NVU0 708 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 NAP1L2Q9ULW6 460 aaPredicted RBP10.33□□□□□ -0.76
TRBV27-201ENST00000390399 KIAA1217Q5T5P2 1943 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
TRBV27-201ENST00000390399 BAZ2BQ9UIF8 2168 aaKnown RBP10.32□□□□□ -0.76
TRBV27-201ENST00000390399 TLR3O15455 904 aaKnown RBP10.32□□□□□ -0.76
TRBV27-201ENST00000390399 MYL3P08590 195 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 CASTP20810 708 aaKnown RBP10.32□□□□□ -0.76
TRBV27-201ENST00000390399 RPS6KB1P23443 525 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 CCND2P30279 289 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 CDK7P50613 346 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 RCAN1P53805 252 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 ITGA7Q13683 1181 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 LY6KQ17RY6 165 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 CCDC62Q6P9F0 684 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 HEATR3Q7Z4Q2 680 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 TDHQ8IZJ6 230 aa10.32□□□□□ -0.76
TRBV27-201ENST00000390399 IL31RAQ8NI17 732 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms