RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 EEF2KMTQ96G04 330 aa19.67■□□□□ 0.74
SQSTM1-202ENST00000389805 UBA5Q9GZZ9 404 aa19.67■□□□□ 0.74
SQSTM1-202ENST00000389805 CD248Q9HCU0 757 aa19.67■□□□□ 0.74
SQSTM1-202ENST00000389805 SUFUQ9UMX1 484 aa19.67■□□□□ 0.74
SQSTM1-202ENST00000389805 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
SQSTM1-202ENST00000389805 FLT1P17948 1338 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 RCCD1A6NED2 376 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 STAT6P42226 847 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 MEX3CQ5U5Q3 659 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 LRRC15Q8TF66 581 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 CEP95Q96GE4 821 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 BARHL2Q9NY43 387 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 DMGDHQ9UI17 866 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 CEP83Q9Y592 693 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 GPR75-ASB3A0A0A6YYF3 556 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 RHBDL3P58872 404 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 CRY2Q49AN0 593 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 NAALADL2Q58DX5 795 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 SMARCAL1Q9NZC9 954 aa19.66■□□□□ 0.74
SQSTM1-202ENST00000389805 ITIH6Q6UXX5 1313 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 KCNJ18B7U540 433 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 PICALMQ13492 652 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 KCNJ12Q14500 433 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 DTHD1Q6ZMT9 781 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 CLEC10AQ8IUN9 316 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 GPIHBP1Q8IV16 184 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 TBC1D16Q8TBP0 767 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 HAUS4Q9H6D7 363 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 SH3GLB2Q9NR46 395 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 ROBO3Q96MS0 1386 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 GTPBP6O43824 516 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 RPN1P04843 607 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 IDEP14735 1019 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 GNAQP50148 359 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 ARL6IP4Q66PJ3 421 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 OTUD6BQ8N6M0 293 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 LRRC1Q9BTT6 524 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 TCP11L1Q9NUJ3 509 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 TARSL2A2RTX5 802 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 TRIM49BA6NDI0 452 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 LONP1P36776 959 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 USP8P40818 1118 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 PRCPP42785 496 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 EIF6P56537 245 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 GTF2IP78347 998 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 CYP27A1Q02318 531 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 DDR1Q08345 913 aa19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 SMCR8Q8TEV9 937 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-202ENST00000389805 IL1R1P14778 569 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 NAPAP54920 295 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 PAPD7Q5XG87 772 aaKnown RBP19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 TSEN2Q8NCE0 465 aaKnown RBP19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 NELFBQ8WX92 580 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 MXD3Q9BW11 206 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 DISC1Q9NRI5 854 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 FAM184BQ9ULE4 1060 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 ATP2B4P23634 1241 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 ATP2B2Q01814 1243 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 CKAP4Q07065 602 aaKnown RBP19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 LETM2Q2VYF4 491 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 TCP11X2Q5H9J9 407 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 C16orf86Q6ZW13 317 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 OR8K1Q8NGG5 319 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 CENPHQ9H3R5 247 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 NHSQ6T4R5 1651 aa19.64■□□□□ 0.73
SQSTM1-202ENST00000389805 KIAA0754O94854 1291 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 TTMPQ5BVD1 217 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 TMED8Q6PL24 325 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 GBP6Q6ZN66 633 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 CNPY4Q8N129 248 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 RBM17Q96I25 401 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 EHD2Q9NZN4 543 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 LIMA1Q9UHB6 759 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 LUC7L2Q9Y383 392 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 MAST2Q6P0Q8 1798 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 FRMPD2Q68DX3 1309 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 SETQ01105 290 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 CABS1Q96KC9 395 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 PIGSQ96S52 555 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 SNED1Q8TER0 1413 aa19.63■□□□□ 0.73
SQSTM1-202ENST00000389805 SMCO2A6NFE2 343 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 PARP1P09874 1014 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 PMS1P54277 932 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 RNF187Q5TA31 235 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 AENQ8WTP8 325 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 RUFY1Q96T51 708 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 CXCR5P32302 372 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 UBA7P41226 1012 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 PAK1Q13153 545 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 TSR1Q2NL82 804 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 ZNF658Q5TYW1 1059 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 WDR59Q6PJI9 974 aa19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 PRPF38AQ8NAV1 312 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-202ENST00000389805 NEDD1Q8NHV4 660 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms