RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 PTPROQ16827 1216 aa17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 TMED8Q6PL24 325 aaPredicted RBP17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 FBXO2Q9UK22 296 aaPredicted RBP17.72■□□□□ 0.43
PTPRN2-201ENST00000389413 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 IGDCC4Q8TDY8 1250 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 COA7Q96BR5 231 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 KRT12Q99456 494 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 TUBE1Q9UJT0 475 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 ENGASEQ8NFI3 743 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 ANTXR2P58335 489 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 MAP3K9P80192 1104 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
PTPRN2-201ENST00000389413 LRRC63Q05C16 580 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 SEPT2Q15019 361 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 GJA10Q969M2 543 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 PCDHA13Q9Y5I0 950 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 H0YIN7 160 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 CYP2D6P10635 497 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 PRCPP42785 496 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 C2orf54Q08AI8 447 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 SPATS2Q86XZ4 545 aaKnown RBP17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 MINPP1Q9UNW1 487 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 MOCS3O95396 460 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 ALDH3A1P30838 453 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 KIF11P52732 1056 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 PABPC4Q13310 644 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 FUCA2Q9BTY2 467 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 DCP1AQ9NPI6 582 aaPredicted RBP17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 RABGAP1Q9Y3P9 1069 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 CSF1RP07333 972 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 INTS8Q75QN2 995 aaKnown RBP17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 FEZ2Q9UHY8 353 aaPredicted RBP17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 TMEM131LA2VDJ0 1609 aa17.7■□□□□ 0.42
PTPRN2-201ENST00000389413 HEXIM1O94992 359 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 STRN3Q13033 797 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 MIER3Q7Z3K6 550 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 HARSP12081 509 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 PRDX5P30044 214 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 CDK8P49336 464 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 MAIP1Q8WWC4 291 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 ANKRD7Q92527 254 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 LARSQ9P2J5 1176 aaKnown RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 USP21Q9UK80 565 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 TRIM49BA6NDI0 452 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 RGS16O15492 202 aaPredicted RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 CXCR5P32302 372 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 LACTBP83111 547 aaPredicted RBP17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 DOK7Q18PE1 504 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 DPH5Q9H2P9 285 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 KIAA0825Q8IV33 1275 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 TRIM7Q9C029 511 aa17.69■□□□□ 0.42
PTPRN2-201ENST00000389413 N4BP1O75113 896 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 GAS8O95995 478 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 NMT2O60551 498 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 AFPP02771 609 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 FERP16591 822 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 KCNQ4P56696 695 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 ATP2C1P98194 919 aaPredicted RBP17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 KCTD16Q68DU8 428 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 DPH6Q7L8W6 267 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 MRPL11Q9Y3B7 192 aaKnown RBP17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 MRFAP1Q9Y605 127 aa17.68■□□□□ 0.42
PTPRN2-201ENST00000389413 CTIFO43310 598 aaKnown RBP17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 BBOX1O75936 387 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 CCT5P48643 541 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.423e-7■■■■■ 33.4
PTPRN2-201ENST00000389413 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 SERPING1P05155 500 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 SLC16A2P36021 539 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 NSMFQ6X4W1 530 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 MXRA7P84157 204 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 WDR24Q96S15 920 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 ADAM21Q9UKJ8 722 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
PTPRN2-201ENST00000389413 FAM170AA1A519 330 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 LMNB1P20700 586 aa17.66■□□□□ 0.42
PTPRN2-201ENST00000389413 PDE6BP35913 854 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms