RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 AFAP1L1Q8TED9 768 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 GMCL1Q96IK5 515 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 KCNH6Q9H252 994 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
IFT88-203ENST00000389373 RBM47A0AV96 593 aaKnown RBP11.43□□□□□ -0.58
IFT88-203ENST00000389373 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 NFIBO00712 420 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 NKRFO15226 690 aaKnown RBP eCLIP11.43□□□□□ -0.58
IFT88-203ENST00000389373 HMMRO75330 724 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 TXNP10599 105 aaKnown RBP11.43□□□□□ -0.58
IFT88-203ENST00000389373 SLC16A2P36021 539 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 PDE4BQ07343 736 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 IKBKEQ14164 716 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 GPNMBQ14956 572 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 EPB41L4AQ9HCS5 686 aaPredicted RBP11.43□□□□□ -0.58
IFT88-203ENST00000389373 CTNNA3Q9UI47 895 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
IFT88-203ENST00000389373 MYH4Q9Y623 1939 aa11.43□□□□□ -0.58
IFT88-203ENST00000389373 ABHD14A-ACY1A0A1B0GW23 586 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 A6NJR5 290 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 GPAA1O43292 621 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 PLA2G6O60733 806 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 NBNO60934 754 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 ICAM1P05362 532 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 CKBP12277 381 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 PTPROQ16827 1216 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 TTBK2Q6IQ55 1244 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
IFT88-203ENST00000389373 CHST3Q7LGC8 479 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 SCFD2Q8WU76 684 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 DHX38Q92620 1227 aaKnown RBP11.42□□□□□ -0.58
IFT88-203ENST00000389373 APPBP2Q92624 585 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 MRPL38Q96DV4 380 aaKnown RBP11.42□□□□□ -0.58
IFT88-203ENST00000389373 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
IFT88-203ENST00000389373 ALG1Q9BT22 464 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 UPF3BQ9BZI7 483 aaKnown RBP11.42□□□□□ -0.58
IFT88-203ENST00000389373 MUC6Q6W4X9 2439 aa11.42□□□□□ -0.58
IFT88-203ENST00000389373 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 PATL2C9JE40 543 aaKnown RBP11.41□□□□□ -0.58
IFT88-203ENST00000389373 M0R2C6 588 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 PARNO95453 639 aaKnown RBP11.41□□□□□ -0.58
IFT88-203ENST00000389373 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
IFT88-203ENST00000389373 GNAT2P19087 354 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 GPM6BQ13491 265 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 CLUL1Q15846 466 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 TCEAL5Q5H9L2 206 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 RNF207Q6ZRF8 634 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 MYOCDQ8IZQ8 938 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 CLDND1Q9NY35 253 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 INSL6Q9Y581 213 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
IFT88-203ENST00000389373 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
IFT88-203ENST00000389373 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
IFT88-203ENST00000389373 NMT2O60551 498 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 EFCAB14O75071 495 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 ARIH2O95376 493 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 CXCL10P02778 98 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 IRS1P35568 1242 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 ZP2Q05996 745 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 LY6KQ17RY6 165 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 EPC2Q52LR7 807 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 ADHFE1Q8IWW8 467 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 C7orf31Q8N865 590 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 PABPC5Q96DU9 382 aaKnown RBP11.4□□□□□ -0.58
IFT88-203ENST00000389373 NACAP1Q9BZK3 213 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 NAPBQ9H115 298 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 RANBP17Q9H2T7 1088 aaKnown RBP11.4□□□□□ -0.58
IFT88-203ENST00000389373 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 INCENPQ9NQS7 918 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 HDAC6Q9UBN7 1215 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 PRKAG3Q9UGI9 489 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 MUTYHQ9UIF7 546 aa11.4□□□□□ -0.58
IFT88-203ENST00000389373 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
IFT88-203ENST00000389373 PTPRSQ13332 1948 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 LOC102724159A0A0B4J2E5 919 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 B4DLN1 442 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 UPP2O95045 317 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 AMHP03971 560 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 MMP3P08254 477 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
IFT88-203ENST00000389373 MRPL12P52815 198 aaKnown RBP11.39□□□□□ -0.59
IFT88-203ENST00000389373 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
IFT88-203ENST00000389373 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 PPARAQ07869 468 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 PWP2Q15269 919 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms