RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ANKRD39Q53RE8 183 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 FAM26FQ5R3K3 315 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 AXDND1Q5T1B0 1012 aaPredicted RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 PRAMEF18Q5VWM3 479 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 C9orf131Q5VYM1 1079 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 INTS3Q68E01 1043 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 TMC4Q7Z404 712 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 ADAT2Q7Z6V5 191 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 CIR1Q86X95 450 aaPredicted RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 REXO1Q8N1G1 1221 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 TTLL6Q8N841 843 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 LINC00482Q8N8I6 264 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 KYQ8NBH2 561 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 ADCY4Q8NFM4 1077 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 IGDCC4Q8TDY8 1250 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 CPA5Q8WXQ8 436 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 NKD1Q969G9 470 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 LCORQ96JN0 433 aaPredicted RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 CDK5RAP1Q96SZ6 601 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 PTPN18Q99952 460 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 SRRTQ9BXP5 876 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 LRRC3Q9BY71 257 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 L2HGDHQ9H9P8 463 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 BTG4Q9NY30 223 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 PRR13Q9NZ81 148 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 PPP4R1LQ9P1A2 415 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 C11orf21Q9P2W6 132 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 GULP1Q9UBP9 304 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 ZDHHC9Q9Y397 364 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 SF3B6Q9Y3B4 125 aaKnown RBP1.11□□□□□ -2.23
SNORD28-201ENST00000384706 TCAF1Q9Y4C2 921 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 LTBP3Q9NS15 1303 aa1.11□□□□□ -2.23
SNORD28-201ENST00000384706 NPHP3-ACAD11A0A0J9YXS1 232 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 C7orf72A4D263 438 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 C2orf71A6NGG8 1288 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 NPIPB8E9PQR5 432 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 STXBP3O00186 592 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 AURKAO14965 403 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 MUSKO15146 869 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 GPR42O15529 346 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 NPHS1O60500 1241 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ZNF623O75123 536 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ITGA4P13612 1032 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PAMP19021 973 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 STAT5AP42229 794 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 SEPHS1P49903 392 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PMS1P54277 932 aaKnown RBP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ITGA1P56199 1179 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 KRTAP10-7P60409 375 aaPredicted RBP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PPP2CBP62714 309 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PPP2CAP67775 309 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 KCNA1Q09470 495 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 SPDYAQ5MJ70 313 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PRR31Q5SQ13 230 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 FBXW10Q5XX13 1052 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 EEF1DP3Q658K8 133 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 WWC2Q6AWC2 1192 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ETV3LQ6ZN32 361 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 UNC5AQ6ZN44 842 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 RUFY4Q6ZNE9 571 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ARHGEF18Q6ZSZ5 1173 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ERMP1Q7Z2K6 904 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 MILR1Q7Z6M3 343 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ZC3H18Q86VM9 953 aaKnown RBP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PPFIBP1Q86W92 1011 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 KBTBD2Q8IY47 623 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 NETO2Q8NC67 525 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 SMARCC1Q92922 1105 aaPredicted RBP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 RNF34Q969K3 372 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ZSWIM3Q96MP5 696 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 WWC2-AS2Q96NR7 200 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 FERD3LQ96RJ6 166 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 YIPF4Q9BSR8 244 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 MTA3Q9BTC8 594 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 MCMBPQ9BTE3 642 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 TMEM168Q9H0V1 697 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 CSRNP2Q9H175 543 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 PCDH18Q9HCL0 1135 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 CD248Q9HCU0 757 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 GPRC5CQ9NQ84 441 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 MARCH2Q9P0N8 246 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 ADAMTS1Q9UHI8 967 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 GGT7Q9UJ14 662 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 CROTQ9UKG9 612 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 DIS3Q9Y2L1 958 aaKnown RBP1.1□□□□□ -2.23
SNORD28-201ENST00000384706 FHOD1Q9Y613 1164 aa1.1□□□□□ -2.23
SNORD28-201ENST00000384706 TRBV23OR9-2A0A075B6M9 112 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 A0A087WZG4 1122 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 C9orf118A6NHY6 69 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 MEIS3P2A8K0S8 358 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 PATE3B3GLJ2 98 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 C22orf46C9J442 243 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 SGSM2O43147 1006 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 PPM1BO75688 479 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 MLLT6P55198 1093 aaPredicted RBP1.09□□□□□ -2.23
SNORD28-201ENST00000384706 NKX3-2P78367 333 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 AMPD2Q01433 879 aa1.09□□□□□ -2.23
SNORD28-201ENST00000384706 FOXE3Q13461 319 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms