RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 GLIS3Q8NEA6 775 aa22.38■■□□□ 1.17
EBF1-202ENST00000380654 SNX29Q8TEQ0 813 aa22.38■■□□□ 1.17
EBF1-202ENST00000380654 PNKPQ96T60 521 aa22.38■■□□□ 1.17
EBF1-202ENST00000380654 MYO1AQ9UBC5 1043 aa22.38■■□□□ 1.17
EBF1-202ENST00000380654 PNMA6FA0A0J9YX94 578 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 ERCC3P19447 782 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 AMPD2Q01433 879 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 MEA1Q16626 185 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 TMEM266Q2M3C6 531 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 SHROOM1Q2M3G4 852 aaPredicted RBP22.37■■□□□ 1.17
EBF1-202ENST00000380654 NCAPH2Q6IBW4 605 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 CDC42EP5Q6NZY7 148 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 ZFPM1Q8IX07 1006 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 RIC8AQ9NPQ8 531 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 USP17L10C9JJH3 530 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 CCDC96Q2M329 555 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 CENPPQ6IPU0 288 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 HDAC6Q9UBN7 1215 aa22.37■■□□□ 1.17
EBF1-202ENST00000380654 RCCD1A6NED2 376 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 IDEP14735 1019 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 UNC13DQ70J99 1090 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 FAM114A1Q8IWE2 563 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 FUT8Q9BYC5 575 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 STK17AQ9UEE5 414 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 PCDHAC2Q9Y5I4 1007 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 FAM196BA6NMK8 535 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 RHOXF2BP0C7M4 288 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 SLC27A3Q5K4L6 730 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 CCDC122Q5T0U0 273 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
EBF1-202ENST00000380654 RAD54LQ92698 747 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 RHOXF2Q9BQY4 288 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 NHEJ1Q9H9Q4 299 aaPredicted RBP22.36■■□□□ 1.17
EBF1-202ENST00000380654 KCNQ5Q9NR82 932 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 MYO6Q9UM54 1294 aa22.36■■□□□ 1.17
EBF1-202ENST00000380654 QSER1Q2KHR3 1735 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 CLK2P49760 499 aaKnown RBP22.35■■□□□ 1.17
EBF1-202ENST00000380654 CACNB3P54284 484 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 LRRC41Q15345 812 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 LONRF2Q1L5Z9 754 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 APOBEC3HQ6NTF7 200 aaKnown RBP22.35■■□□□ 1.17
EBF1-202ENST00000380654 PROM2Q8N271 834 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 HAS1Q92839 578 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 LACRTQ9GZZ8 138 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 POLR3GO15318 223 aaPredicted RBP22.35■■□□□ 1.17
EBF1-202ENST00000380654 RAD21O60216 631 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 ZBED6P86452 979 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 COBLL1Q53SF7 1204 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 NOA1Q8NC60 698 aaKnown RBP22.35■■□□□ 1.17
EBF1-202ENST00000380654 DDX12PQ92771 950 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 ZBTB9Q96C00 473 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 HAUS4Q9H6D7 363 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 SWAP70Q9UH65 585 aa22.35■■□□□ 1.17
EBF1-202ENST00000380654 DDX25Q9UHL0 483 aaKnown RBP22.35■■□□□ 1.17
EBF1-202ENST00000380654 CCDC151A5D8V7 595 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 EPHB6O15197 1021 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 ATP8B1O43520 1251 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 CYP27A1Q02318 531 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 TUBB2AQ13885 445 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 PDIA5Q14554 519 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 KRT79Q5XKE5 535 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 GPIHBP1Q8IV16 184 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 ERGIC2Q96RQ1 377 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 TUBB2BQ9BVA1 445 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 NUP58Q9BVL2 599 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 SUGT1Q9Y2Z0 365 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 DUSP10Q9Y6W6 482 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 KIF20AO95235 890 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 PLEKP08567 350 aaPredicted RBP22.34■■□□□ 1.17
EBF1-202ENST00000380654 PPP1R2P41236 205 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 WHAMMP3Q1A5X7 153 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 KIAA1328Q86T90 577 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 CUL5Q93034 780 aa22.34■■□□□ 1.17
EBF1-202ENST00000380654 ZCCHC17Q9NP64 241 aaKnown RBP22.34■■□□□ 1.17
EBF1-202ENST00000380654 ARFGEF1Q9Y6D6 1849 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 CTAGE15A4D2H0 777 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 ATP1A1P05023 1023 aaKnown RBP22.33■■□□□ 1.17
EBF1-202ENST00000380654 CTAGE8P0CG41 777 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 TMC4Q7Z404 712 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 CTAGE6Q86UF2 777 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 CTAGE4Q8IX94 777 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 RETREG2Q8NC44 543 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 MSANTD4Q8NCY6 345 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 RAB34Q9BZG1 259 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 UBXN6Q9BZV1 441 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 DNAJC18Q9H819 358 aa22.33■■□□□ 1.17
EBF1-202ENST00000380654 TRPC5Q9UL62 973 aaPredicted RBP22.33■■□□□ 1.17
EBF1-202ENST00000380654 PVALEFA0A1B0GWK0 134 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 ZBTB5O15062 677 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 TCP10Q12799 353 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 TMEM119Q4V9L6 283 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 PPP4R3AQ6IN85 833 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 JAKMIP2Q96AA8 810 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 ZNHIT6Q9NWK9 470 aaKnown RBP22.32■■□□□ 1.16
EBF1-202ENST00000380654 GREB1LQ9C091 1923 aaPredicted RBP22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L15C9J2P7 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L13C9JLJ4 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L11C9JVI0 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L18D6R9N7 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L22D6RA61 530 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms