RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TNNI1P19237 187 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 MSH2P43246 934 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 OTUD6AQ7L8S5 288 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 TNKSO95271 1327 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 FGAP02671 866 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 SLC1A4P43007 532 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 DR1Q01658 176 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 NAA35Q5VZE5 725 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 HINFPQ9BQA5 517 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 PCDHA12Q9UN75 941 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 PPP2R5DQ14738 602 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 ZMYM1Q5SVZ6 1142 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 SLC17A8Q8NDX2 589 aa18.58■□□□□ 0.56
COL4A3BP-203ENST00000380494 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 PRPF6O94906 941 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 SGO2Q562F6 1265 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 GGCXP38435 758 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 NSFP46459 744 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 PLEKHF1Q96S99 279 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 TADA3O75528 432 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 YWHAGP61981 247 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 TCP11X2Q5H9J9 407 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 SCYL1Q96KG9 808 aa18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 SAMSN1Q9NSI8 373 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 DDX25Q9UHL0 483 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 SRPRBQ9Y5M8 271 aaKnown RBP18.57■□□□□ 0.56
COL4A3BP-203ENST00000380494 APOEP02649 317 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 UBE3CQ15386 1083 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 CAPN12Q6ZSI9 719 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 TPH2Q8IWU9 490 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 MX2P20592 715 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 NRBF2Q96F24 287 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 NCAPGQ9BPX3 1015 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 ESRRAP11474 423 aaPredicted RBP18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 PTPROQ16827 1216 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 JADE1Q6IE81 842 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 STOML1Q9UBI4 398 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 MMEP08473 750 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 EIF4A3P38919 411 aaKnown RBP18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 MAEAQ7L5Y9 396 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 MB21D1Q8N884 522 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 EDC3Q96F86 508 aaKnown RBP18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 TTI1O43156 1089 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 MMP1P03956 469 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 CYP2C19P33261 490 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 GYS2P54840 703 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 PDCLQ13371 301 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 LARP4BQ92615 738 aaKnown RBP18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 DTNBP1Q96EV8 351 aa18.56■□□□□ 0.56
COL4A3BP-203ENST00000380494 TARSL2A2RTX5 802 aaKnown RBP18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 GCP02774 474 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 SP4Q02446 784 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 PSMD2Q13200 908 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 ARMC2Q8NEN0 867 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 NFU1Q9UMS0 254 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 PCDHA4Q9UN74 947 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 GMNCA6NCL1 334 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 TMCO4Q5TGY1 634 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 SRLQ86TD4 932 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 GAS7O60861 476 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 SPAG7O75391 227 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 CHGBP05060 677 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 MESDQ14696 234 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 ATG16L1Q676U5 607 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 OLFM3Q96PB7 478 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 FTCDO95954 541 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 GAP43P17677 238 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 BAG5Q9UL15 447 aa18.55■□□□□ 0.56
COL4A3BP-203ENST00000380494 PODXLO00592 558 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 IRX1P78414 480 aaPredicted RBP18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 TRIM50Q86XT4 487 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 GRID2IPA4D2P6 1211 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 K7ENM7 598 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 MYO1FO00160 1098 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 KRT80Q6KB66 452 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 NLRP14Q86W24 1093 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 MRFAP1Q9Y605 127 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 CCNE1P24864 410 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 PSMC2P35998 433 aaKnown RBP18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 STX1BP61266 288 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 NR1H3Q13133 447 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 PDE6AP16499 860 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 EIF6P56537 245 aaKnown RBP18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 IPO5O00410 1097 aaKnown RBP18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 MT-ND3P03897 115 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 INPP1P49441 399 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 RESP18Q5W5W9 173 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 MAP7D3Q8IWC1 876 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 FAM178BQ8IXR5 827 aa18.54■□□□□ 0.56
COL4A3BP-203ENST00000380494 GPC4O75487 556 aa18.53■□□□□ 0.56
COL4A3BP-203ENST00000380494 CXCR5P32302 372 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms