RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 IDEP14735 1019 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 FXR2P51116 673 aaKnown RBP eCLIP18.17■□□□□ 0.5
VPS16-203ENST00000380469 CYP27A1Q02318 531 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 LARP4BQ92615 738 aaKnown RBP18.17■□□□□ 0.5
VPS16-203ENST00000380469 LRRC27Q9C0I9 530 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 MACROD2A1Z1Q3 448 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 MYMKA6NI61 221 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 N4BP1O75113 896 aaKnown RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 ADCY7P51828 1080 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 CCDC84Q86UT8 332 aaPredicted RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 NDST4Q9H3R1 872 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 VIPAS39Q9H9C1 493 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 MED4Q9NPJ6 270 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 IL1R1P14778 569 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 HNRNPH3P31942 346 aaKnown RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 PDIA5Q14554 519 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 ZSCAN26Q16670 478 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 BLOC1S4Q9NUP1 217 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
VPS16-203ENST00000380469 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 FAN1Q9Y2M0 1017 aa18.16■□□□□ 0.5
VPS16-203ENST00000380469 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 GUF1Q8N442 669 aaKnown RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 TRIM58Q8NG06 486 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 FAM163AQ96GL9 167 aaPredicted RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 CWC15Q9P013 229 aaKnown RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 DUSP10Q9Y6W6 482 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 ABCB11O95342 1321 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 FRMPD2Q68DX3 1309 aaPredicted RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 LRRIQ3A6PVS8 624 aaPredicted RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 TACC1O75410 805 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 PDHBP11177 359 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 TNNT3P45378 269 aaPredicted RBP18.15■□□□□ 0.5
VPS16-203ENST00000380469 NOVP48745 357 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 RHBDL3P58872 404 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 VPS72Q15906 364 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 ASPRV1Q53RT3 343 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 MFSD14BQ5SR56 506 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 KRT79Q5XKE5 535 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 CCDC70Q6NSX1 233 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 C2CD5Q86YS7 1000 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 GOLGA5Q8TBA6 731 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 PNMA5Q96PV4 448 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 DEF6Q9H4E7 631 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 MMRN2Q9H8L6 949 aa18.15■□□□□ 0.5
VPS16-203ENST00000380469 CDK5RAP2Q96SN8 1893 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 PSMD2Q13200 908 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 RAD54LQ92698 747 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 COA7Q96BR5 231 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 TSG101Q99816 390 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 IFIH1Q9BYX4 1025 aaKnown RBP18.14■□□□□ 0.49
VPS16-203ENST00000380469 FAM207AQ9NSI2 230 aaPredicted RBP18.14■□□□□ 0.49
VPS16-203ENST00000380469 SIK3Q9Y2K2 1263 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 JRKLQ9Y4A0 524 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 PCDHA13Q9Y5I0 950 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 LEKR1Q6ZMV7 388 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
VPS16-203ENST00000380469 TBC1D22AQ8WUA7 517 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 ZBTB9Q96C00 473 aa18.14■□□□□ 0.49
VPS16-203ENST00000380469 SLC37A4O43826 429 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 PLEKP08567 350 aaPredicted RBP18.13■□□□□ 0.49
VPS16-203ENST00000380469 ACTN2P35609 894 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 SNX29Q8TEQ0 813 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 MTMR4Q9NYA4 1195 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 BTAF1O14981 1849 aa18.13■□□□□ 0.49
VPS16-203ENST00000380469 ZNF185O15231 689 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 TDP2O95551 362 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 CAPN2P17655 700 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 KRT26Q7Z3Y9 468 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 ARHGAP20Q9P2F6 1191 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 ZNF263O14978 683 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 NKRFO15226 690 aaKnown RBP eCLIP18.12■□□□□ 0.49
VPS16-203ENST00000380469 AKR1B10O60218 316 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 EIF4A3P38919 411 aaKnown RBP18.12■□□□□ 0.49
VPS16-203ENST00000380469 KIF11P52732 1056 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 GOLGA6L1Q8N7Z2 621 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 RBM17Q96I25 401 aaKnown RBP18.12■□□□□ 0.49
VPS16-203ENST00000380469 SNX12Q9UMY4 172 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 GAKO14976 1311 aa18.12■□□□□ 0.49
VPS16-203ENST00000380469 POTEMA6NI47 508 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 PHACTR2O75167 634 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 RRAGAQ7L523 313 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 DDX12PQ92771 950 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms