RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RNF187Q5TA31 235 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 NLRP3Q96P20 1036 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 CAPN6Q9Y6Q1 641 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 GRIN2DO15399 1336 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 EIF3HO15372 352 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 DDAH1O94760 285 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 PDCLQ13371 301 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 CCDC181Q5TID7 509 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 MS4A14Q96JA4 679 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 PIGSQ96S52 555 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 BRIP1Q9BX63 1249 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 DMGDHQ9UI17 866 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 MYH10P35580 1976 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 ZEB2O60315 1214 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 TNNI2P48788 182 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 IFT81Q8WYA0 676 aa13.81□□□□□ -0.2
PRPF40B-202ENST00000380281 NUP188Q5SRE5 1749 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 CHUKO15111 745 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 CALML3P27482 149 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 ATP1A2P50993 1020 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 TMEM47Q9BQJ4 181 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 ZNF652Q9Y2D9 606 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 LDHBP07195 334 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 CYLC1P35663 651 aaPredicted RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 EIF4A3P38919 411 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 RASSF7Q02833 373 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 NFIXQ14938 502 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 WDR93Q6P2C0 686 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 CCDC51Q96ER9 411 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 LRRC1Q9BTT6 524 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 IFIH1Q9BYX4 1025 aaKnown RBP13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 GOLPH3Q9H4A6 298 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 VIPAS39Q9H9C1 493 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 SLIT2O94813 1529 aa13.8□□□□□ -0.2
PRPF40B-202ENST00000380281 ZSCAN5CA6NGD5 496 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 GNPATO15228 680 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 E2F5Q15329 346 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 SELENOOQ9BVL4 669 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 BSDC1Q9NW68 430 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 ANAPC4Q9UJX5 808 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 AMPD2Q01433 879 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 PPFIA1Q13136 1202 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 C4orf32Q8N8J7 132 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 P2RX5Q93086 422 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 NUDT12Q9BQG2 462 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 MYH6P13533 1939 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 ZNF263O14978 683 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 KLRC4O43908 158 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 RPSAP08865 295 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 PDHBP11177 359 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 SLC16A2P36021 539 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 USP14P54578 494 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 UBE2SQ16763 222 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 ELOA2Q8IYF1 753 aaPredicted RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 CCDC47Q96A33 483 aaKnown RBP13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 KLC4Q9NSK0 619 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 MYH13Q9UKX3 1938 aa13.79□□□□□ -0.2
PRPF40B-202ENST00000380281 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 SPEF2Q9C093 1822 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 COL4A1P02462 1669 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 TDP2O95551 362 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 DNM2P50570 870 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 GUCY2FP51841 1108 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 DDR1Q08345 913 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 TEX11Q8IYF3 940 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 CEP120Q8N960 986 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 CALR3Q96L12 384 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 MAD2L2Q9UI95 211 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 CCNHP51946 323 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 CLNS1AP54105 237 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 KRT83P78385 493 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-202ENST00000380281 LRRC10BA6NIK2 292 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms