RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MBOAT7Q96N66 472 aa22.33■■□□□ 1.17
PDLIM5-205ENST00000380180 STX17P56962 302 aa22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 LRMPQ12912 555 aa22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 MOXD1Q6UVY6 613 aa22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 PNMA5Q96PV4 448 aa22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 NUDT12Q9BQG2 462 aa22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 SAMSN1Q9NSI8 373 aaKnown RBP22.33■■□□□ 1.16
PDLIM5-205ENST00000380180 KLRC4O43908 158 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 SREBF1P36956 1147 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 PRAMEF18Q5VWM3 479 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 CACTINQ8WUQ7 758 aaKnown RBP22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 UIMC1Q96RL1 719 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 KIAA1683Q9H0B3 1180 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 KCNMB3Q9NPA1 279 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 PYCARDQ9ULZ3 195 aa22.32■■□□□ 1.16
PDLIM5-205ENST00000380180 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 CDK11BP21127 795 aaKnown RBP22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 KMT5BQ4FZB7 885 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 SPATA1Q5VX52 437 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 KRT79Q5XKE5 535 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 DCAF15Q66K64 600 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 APOBEC3FQ8IUX4 373 aaKnown RBP22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 SNX29Q8TEQ0 813 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 CBFA2T2O43439 604 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 CFBP00751 764 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 KCNB1Q14721 858 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 LPAR1Q92633 364 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 CDK5RAP3Q96JB5 506 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 BLOC1S4Q9NUP1 217 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 GDAQ9Y2T3 454 aa22.31■■□□□ 1.16
PDLIM5-205ENST00000380180 WDR46O15213 610 aaKnown RBP22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 EPS15P42566 896 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 DGKZQ13574 1117 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 ARID5BQ14865 1188 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 TMC6Q7Z403 805 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 FCHSD1Q86WN1 690 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 LRRC8AQ8IWT6 810 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 C7orf25Q9BPX7 421 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 TRIM9Q9C026 710 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 IMPACTQ9P2X3 320 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 STK17AQ9UEE5 414 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 CTNND2Q9UQB3 1225 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 HIRAP54198 1017 aaPredicted RBP22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 AMPD3Q01432 767 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 DHX8Q14562 1220 aaKnown RBP22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 Q4G0T1 1027 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 PRR16Q569H4 304 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 LDHDQ86WU2 507 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 KIAA1524Q8TCG1 905 aa22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 MRPL11Q9Y3B7 192 aaKnown RBP22.3■■□□□ 1.16
PDLIM5-205ENST00000380180 FAM86B1E9PN63 330 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 RHOBTB3O94955 611 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 FAM86B2P0C5J1 330 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 PRCPP42785 496 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 SV2BQ7L1I2 683 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 TEX2Q8IWB9 1127 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 C17orf53Q8N3J3 647 aaPredicted RBP22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 PRPF38AQ8NAV1 312 aaKnown RBP22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 ZNF112Q9UJU3 913 aa22.29■■□□□ 1.16
PDLIM5-205ENST00000380180 GCOM1H8Y6P7 765 aaPredicted RBP22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 POLR2MP0CAP2 368 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 CIITAP33076 1130 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 SEMA3FQ13275 785 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 SLFN12Q8IYM2 578 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 LENG9Q96B70 501 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 GGA3Q9NZ52 723 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 FZD1Q9UP38 647 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 MAPK8IP1Q9UQF2 711 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 PARP14Q460N5 1801 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 CYP3A4P08684 503 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 MCM6Q14566 821 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 ECM1Q16610 540 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 ETNPPLQ8TBG4 499 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 LARP4BQ92615 738 aaKnown RBP22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 ZKSCAN4Q969J2 545 aaPredicted RBP22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 HOOK2Q96ED9 719 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 SLF1Q9BQI6 1058 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 RWDD2AQ9UIY3 292 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 PHIPQ8WWQ0 1821 aa22.28■■□□□ 1.16
PDLIM5-205ENST00000380180 ABCB11O95342 1321 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 COBLO75128 1261 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 PAK1Q13153 545 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 MTMR2Q13614 643 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 NOLC1Q14978 699 aaKnown RBP eCLIP22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 TMEM119Q4V9L6 283 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 SCYL3Q8IZE3 742 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 AGBL1Q96MI9 1066 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 WRNIP1Q96S55 665 aa22.27■■□□□ 1.16
PDLIM5-205ENST00000380180 ZNF536O15090 1300 aa22.27■■□□□ 1.15
PDLIM5-205ENST00000380180 TBX3O15119 743 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 GSDMDP57764 484 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 ASIC1P78348 528 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 KCNK18Q7Z418 384 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 ADSSL1Q8N142 457 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 GIMAP8Q8ND71 665 aaPredicted RBP22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 NELFBQ8WX92 580 aa22.26■■□□□ 1.15
PDLIM5-205ENST00000380180 RAD54LQ92698 747 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms