RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZSCAN29Q8IWY8 852 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 DUSP9Q99956 384 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 EHD4Q9H223 541 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 CUEDC2Q9H467 287 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 ITIH6Q6UXX5 1313 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 SNAP25P60880 206 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 ASIC1P78348 528 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 UBXN1Q04323 297 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 SEPT2Q15019 361 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 ECM1Q16610 540 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 ERCC6LQ2NKX8 1250 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 KCNK18Q7Z418 384 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 MTMR8Q96EF0 704 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 TRIM47Q96LD4 638 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 C7orf25Q9BPX7 421 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.93□□□□□ -0.983e-6■■□□□ 12.3
PDLIM5-204ENST00000380176 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 MYMKA6NI61 221 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 URI1O94763 535 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 GDF11O95390 407 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ABL1P00519 1130 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 GNG11P61952 73 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ERVK-24P63145 666 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 SPAG1Q07617 926 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 CERKLQ49MI3 558 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 GPATCH4Q5T3I0 446 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ANKRD40Q6AI12 368 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L6PQ6QN14 398 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 KIAA0895Q8NCT3 520 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 HAS1Q92839 578 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 CALML4Q96GE6 196 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 TDRD3Q9H7E2 651 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 LZTFL1Q9NQ48 299 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 C10orf71Q711Q0 1435 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 TNS1Q9HBL0 1735 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 PSMA7O14818 248 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 TUBB4AP04350 444 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 QRICH1Q2TAL8 776 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 DYMQ7RTS9 669 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 REM2Q8IYK8 340 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ZNF507Q8TCN5 953 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 C7orf43Q8WVR3 580 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 CUL5Q93034 780 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 CCDC17Q96LX7 622 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 NUP88Q99567 741 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 IDI2Q9BXS1 227 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 PSTPIP2Q9H939 334 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 SLC39A2Q9NP94 309 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ABHD10Q9NUJ1 306 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 EXOC1Q9NV70 894 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 PI4KBQ9UBF8 816 aa8.92□□□□□ -0.98
PDLIM5-204ENST00000380176 ORC2Q13416 577 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 RRP1BQ14684 758 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 STYK1Q6J9G0 422 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CNGA4Q8IV77 575 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 MB21D1Q8N884 522 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 KIFC2Q96AC6 838 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 MRIQ9BWK5 157 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 DHX36Q9H2U1 1008 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 MAGEF1Q9HAY2 307 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 DDX25Q9UHL0 483 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 YDJCA8MPS7 323 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PES1O00541 588 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CCDC175P0C221 793 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 FECHP22830 423 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 HMGB2P26583 209 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 KRT9P35527 623 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 SLC1A4P43007 532 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 STIM1Q13586 685 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 SLFN13Q68D06 897 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PPP4R3AQ6IN85 833 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 TATDN1Q6P1N9 297 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CSGALNACT2Q8N6G5 542 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 ACRBPQ8NEB7 543 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 ANKRD20A12PQ8NF67 263 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 SNX29Q8TEQ0 813 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 P2RX5Q93086 422 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 MKL1Q969V6 931 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 DHTKD1Q96HY7 919 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PRMT6Q96LA8 375 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 P2RX7Q99572 595 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 CHP1Q99653 195 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 THAP9Q9H5L6 903 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 TTC26A0AVF1 554 aa8.91□□□□□ -0.98
PDLIM5-204ENST00000380176 PITPNM1O00562 1244 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms