RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 CDK5RAP3Q96JB5 506 aa28.02■■■□□ 2.08
NDEL1-202ENST00000380025 VPS16Q9H269 839 aa28.02■■■□□ 2.08
NDEL1-202ENST00000380025 STK4Q13043 487 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 IKQ13123 557 aaPredicted RBP28.01■■■□□ 2.08
NDEL1-202ENST00000380025 MCM6Q14566 821 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 TMEM119Q4V9L6 283 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 TTI2Q6NXR4 508 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 ANKRD20A12PQ8NF67 263 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 VPS33BQ9H267 617 aa28.01■■■□□ 2.08
NDEL1-202ENST00000380025 PPFIBP1Q86W92 1011 aa28.01■■■□□ 2.07
NDEL1-202ENST00000380025 FBXO11Q86XK2 927 aa28.01■■■□□ 2.07
NDEL1-202ENST00000380025 PANX2Q96RD6 677 aa28.01■■■□□ 2.07
NDEL1-202ENST00000380025 P2RX7Q99572 595 aaKnown RBP28.01■■■□□ 2.07
NDEL1-202ENST00000380025 MYMKA6NI61 221 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 FCER1AP12319 257 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 USP11P51784 963 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 AP3B2Q13367 1082 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 REXO1L1PQ8IX06 675 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 KIF18AQ8NI77 898 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 RAD54LQ92698 747 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 ZNRF3Q9ULT6 936 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 ECE1P42892 770 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 CRYGNQ8WXF5 182 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 THAP9Q9H5L6 903 aa28■■■□□ 2.07
NDEL1-202ENST00000380025 CYP3A7-CYP3A51PA0A087WV96 503 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 CYP3A7P24462 503 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 USH1GQ495M9 461 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 KCNK18Q7Z418 384 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 SPICE1Q8N0Z3 855 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 TRIM47Q96LD4 638 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 MBOAT7Q96N66 472 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 GTPBP4Q9BZE4 634 aaKnown RBP27.99■■■□□ 2.07
NDEL1-202ENST00000380025 PCDHA12Q9UN75 941 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 GYPCP04921 128 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 ECM1Q16610 540 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 COBLL1Q53SF7 1204 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 DUSP9Q99956 384 aaKnown RBP27.99■■■□□ 2.07
NDEL1-202ENST00000380025 KCNMB3Q9NPA1 279 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 PPP2R2CQ9Y2T4 447 aa27.99■■■□□ 2.07
NDEL1-202ENST00000380025 MFAP3LO75121 409 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 KIAA1755Q5JYT7 1200 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 CNNM4Q6P4Q7 775 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 CREBRFQ8IUR6 639 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 NIM1KQ8IY84 436 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 KIAA0895Q8NCT3 520 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 P2RX5Q93086 422 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 SRRTQ9BXP5 876 aaKnown RBP27.98■■■□□ 2.07
NDEL1-202ENST00000380025 VEZTQ9HBM0 779 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 ARHGEF10LQ9HCE6 1279 aa27.98■■■□□ 2.07
NDEL1-202ENST00000380025 MARCH6O60337 910 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 CCNE1P24864 410 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 EEF1GP26641 437 aaKnown RBP27.97■■■□□ 2.07
NDEL1-202ENST00000380025 MMP14P50281 582 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 CDAN1Q8IWY9 1227 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 MTMR14Q8NCE2 650 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 AGBL3Q8NEM8 1001 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 ACER1Q8TDN7 264 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 CPLX3Q8WVH0 158 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 ZBTB21Q9ULJ3 1066 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 ZSCAN12O43309 604 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 TAL1P17542 331 aaPredicted RBP27.97■■■□□ 2.07
NDEL1-202ENST00000380025 CASP14P31944 242 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 FKBP1CQ5VVH2 108 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 MOXD1Q6UVY6 613 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 TOGARAM2Q6ZUX3 1019 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 UNC13DQ70J99 1090 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 HPS3Q969F9 1004 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 PRR12Q9ULL5 1215 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 TMX2Q9Y320 296 aa27.97■■■□□ 2.07
NDEL1-202ENST00000380025 PVALEFA0A1B0GWK0 134 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 TUBB4AP04350 444 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 PPP1R2P41236 205 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 SYT10Q6XYQ8 523 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 ZNF710Q8N1W2 664 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 TMEM39BQ9GZU3 492 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 OPLAHO14841 1288 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 FXR1P51114 621 aaKnown RBP eCLIP27.96■■■□□ 2.07
NDEL1-202ENST00000380025 ARHGAP4P98171 946 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 MCTP2Q6DN12 878 aa27.96■■■□□ 2.07
NDEL1-202ENST00000380025 NOC3LQ8WTT2 800 aaKnown RBP27.96■■■□□ 2.07
NDEL1-202ENST00000380025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.96■■■□□ 2.07
NDEL1-202ENST00000380025 BICDL2A1A5D9 508 aa27.95■■■□□ 2.06
NDEL1-202ENST00000380025 HYIQ5T013 277 aa27.95■■■□□ 2.06
NDEL1-202ENST00000380025 ANKRD40Q6AI12 368 aa27.95■■■□□ 2.06
NDEL1-202ENST00000380025 TRIM65Q6PJ69 517 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 DYMQ7RTS9 669 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 CNGA4Q8IV77 575 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 CSGALNACT2Q8N6G5 542 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 STAT2P52630 851 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 ETF1P62495 437 aaKnown RBP27.94■■■□□ 2.06
NDEL1-202ENST00000380025 CXCL9Q07325 125 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 ZBED3Q96IU2 234 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-202ENST00000380025 UIMC1Q96RL1 719 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 NAA15Q9BXJ9 866 aaKnown RBP27.94■■■□□ 2.06
NDEL1-202ENST00000380025 SLC39A2Q9NP94 309 aa27.94■■■□□ 2.06
NDEL1-202ENST00000380025 SMCHD1A6NHR9 2005 aa27.93■■■□□ 2.06
NDEL1-202ENST00000380025 LGALS16A8MUM7 142 aa27.93■■■□□ 2.06
NDEL1-202ENST00000380025 TBC1D12O60347 775 aa27.93■■■□□ 2.06
NDEL1-202ENST00000380025 UBXN1Q04323 297 aa27.93■■■□□ 2.06
NDEL1-202ENST00000380025 KDM3AQ9Y4C1 1321 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms