RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TYW1BQ6NUM6 668 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 NFXL1Q6ZNB6 911 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 MIGA2Q7L4E1 593 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 WRNIP1Q96S55 665 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 FBXO2Q9UK22 296 aaPredicted RBP8.78□□□□□ -1
CDKL5-202ENST00000379996 SLC45A1Q9Y2W3 748 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 CNTNAP5Q8WYK1 1306 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 FAM196BA6NMK8 535 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 CXCL11O14625 94 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 GDF11O95390 407 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 ZNF18P17022 549 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 VGLL4Q14135 290 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 SLC4A8Q2Y0W8 1093 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 RAB11FIP4Q86YS3 637 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 SMC1BQ8NDV3 1235 aa8.78□□□□□ -1
CDKL5-202ENST00000379996 A0A1W2PRG0 241 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 WDR46O15213 610 aaKnown RBP8.77□□□□□ -1
CDKL5-202ENST00000379996 POTEIP0CG38 1075 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 POTEJP0CG39 1038 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 SKILP12757 684 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 GSDMDP57764 484 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1
CDKL5-202ENST00000379996 GLIPR1L2Q4G1C9 344 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 UTP14CQ5TAP6 766 aaKnown RBP8.77□□□□□ -1
CDKL5-202ENST00000379996 USP17L2Q6R6M4 530 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 APTXQ7Z2E3 356 aaKnown RBP8.77□□□□□ -1
CDKL5-202ENST00000379996 ERO1BQ86YB8 467 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 ZNF280CQ8ND82 737 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 CTCFLQ8NI51 663 aaPredicted RBP8.77□□□□□ -1
CDKL5-202ENST00000379996 SH3GLB2Q9NR46 395 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 PICK1Q9NRD5 415 aa8.77□□□□□ -1
CDKL5-202ENST00000379996 A0A0G2JLL6 359 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 MMP1P03956 469 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 FDX1P10109 184 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 BACE1P56817 501 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 NPY5RQ15761 445 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 DNTTIP2Q5QJE6 756 aaKnown RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 CEP135Q66GS9 1140 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 TRIM65Q6PJ69 517 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 CPLX2Q6PUV4 134 aaKnown RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PRRT2Q7Z6L0 340 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 DEPDC4Q8N2C3 294 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 WASF1Q92558 559 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PHKBQ93100 1093 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PPP1R13BQ96KQ4 1090 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 ALG1Q9BT22 464 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PNMA2Q9UL42 364 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 MPHOSPH10O00566 681 aaKnown RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PARP1P09874 1014 aaKnown RBP8.77□□□□□ -1.01
CDKL5-202ENST00000379996 INPP5BP32019 993 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 DMTNQ08495 405 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 LBX2Q6XYB7 198 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 FAM160B2Q86V87 743 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 PNMA3Q9UL41 463 aa8.77□□□□□ -1.01
CDKL5-202ENST00000379996 F5H6K3 240 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ZBTB48P10074 688 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ATP1A3P13637 1013 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 GRIN1Q05586 938 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 KLRC3Q07444 240 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 STK38Q15208 465 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 NAT10Q9H0A0 1025 aaKnown RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ZCCHC17Q9NP64 241 aaKnown RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 FEM1BQ9UK73 627 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ADAMTS5Q9UNA0 930 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 STX8Q9UNK0 236 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 CSADQ9Y600 493 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 GOLGA6L19H0YKK7 550 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 CUTAO60888 179 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 TOMM70O94826 608 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 NDUFB10O96000 172 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 SHROOM1Q2M3G4 852 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 LONRF3Q496Y0 759 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 GBA2Q9HCG7 927 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 DEXIO95424 95 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 GHRHRQ02643 423 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 PKN1Q16512 942 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 MAP1SQ66K74 1059 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 SLFN13Q68D06 897 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 KRBA2Q6ZNG9 492 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 CCDC150Q8NCX0 1101 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 IFNKQ9P0W0 207 aa8.76□□□□□ -1.01
CDKL5-202ENST00000379996 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
CDKL5-202ENST00000379996 ZNF236Q9UL36 1845 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 RXRAP19793 462 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 PTPREP23469 700 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 HOXA7P31268 230 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-202ENST00000379996 PNOCQ13519 176 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 MOGSQ13724 837 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 CST9Q5W186 159 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 SH3RF1Q7Z6J0 888 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 MICU3Q86XE3 530 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
CDKL5-202ENST00000379996 VSTM4Q8IW00 320 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms