RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 VPS36Q86VN1 386 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 SPICE1Q8N0Z3 855 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 DRAXINQ8NBI3 349 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 SLC17A8Q8NDX2 589 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 DNAJC9Q8WXX5 260 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 NLRP3Q96P20 1036 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 ZHX3Q9H4I2 956 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 CAPN6Q9Y6Q1 641 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 A0A0G2JLW4 131 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 RPN1P04843 607 aaKnown RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 KRT2P35908 639 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 ITGB3BPQ13352 177 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 CUL1Q13616 776 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 TRIM42Q8IWZ5 723 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 RAB17Q9H0T7 212 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 KCNJ2P63252 427 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 LRRC34Q8IZ02 419 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
USP6NL-202ENST00000379237 INO80Q9ULG1 1556 aaPredicted RBP11.98□□□□□ -0.49
USP6NL-202ENST00000379237 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
USP6NL-202ENST00000379237 RFC5P40937 340 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 VPS52Q8N1B4 723 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 GDAP1Q8TB36 358 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 CASKIN2Q8WXE0 1202 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 EPAS1Q99814 870 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 NACAP1Q9BZK3 213 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 DPPA5A6NC42 116 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 ECEL1O95672 775 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 KCNA3P22001 575 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 EEF1GP26641 437 aaKnown RBP11.97□□□□□ -0.49
USP6NL-202ENST00000379237 SCNN1BP51168 640 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 PDE4DQ08499 809 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 BLMHQ13867 455 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 OTUD6AQ7L8S5 288 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 TSG101Q99816 390 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 TXLNGQ9NUQ3 528 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
USP6NL-202ENST00000379237 GSTA1P08263 222 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 COG7P83436 770 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 HAUS1Q96CS2 278 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
USP6NL-202ENST00000379237 PAIP2BQ9ULR5 123 aaKnown RBP11.97□□□□□ -0.49
USP6NL-202ENST00000379237 CAPN11Q9UMQ6 739 aa11.97□□□□□ -0.49
USP6NL-202ENST00000379237 ABCA6Q8N139 1617 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 FAM170AA1A519 330 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 PALMO75781 387 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 DEXIO95424 95 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 ZMYM1Q5SVZ6 1142 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 MFSD6Q6ZSS7 791 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 SNRNP27Q8WVK2 155 aaKnown RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 NAP1L3Q99457 506 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 KRT23Q9C075 422 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 MMADHCQ9H3L0 296 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 COL3A1P02461 1466 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 MAST3O60307 1309 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 CDK12Q9NYV4 1490 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 ATF3P18847 181 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 GCLCP48506 637 aaPredicted RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 LRIG3Q6UXM1 1119 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 PEX26Q7Z412 305 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 CREG2Q8IUH2 290 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 CNOT6LQ96LI5 555 aaKnown RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 FMO2Q99518 471 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP6NL-202ENST00000379237 ZNF711Q9Y462 761 aa11.96□□□□□ -0.49
USP6NL-202ENST00000379237 TXNDC9O14530 226 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 RAD51CO43502 376 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 ORC4O43929 436 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 PLTPP55058 493 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 PTPAQ15257 358 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 ARL10Q8N8L6 244 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 RPS6KC1Q96S38 1066 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 STOML1Q9UBI4 398 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.5
USP6NL-202ENST00000379237 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 GPAA1O43292 621 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.5
USP6NL-202ENST00000379237 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
USP6NL-202ENST00000379237 FAM228AQ86W67 206 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms