RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 DUSP28Q4G0W2 176 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 TTC14Q96N46 770 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 MSRAQ9UJ68 235 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
PRPF18-202ENST00000378572 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 B4DLN1 442 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 PBX2P40425 430 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
PRPF18-202ENST00000378572 RPS6P62753 249 aaKnown RBP15.98■□□□□ 0.15
PRPF18-202ENST00000378572 GPATCH4Q5T3I0 446 aaKnown RBP15.98■□□□□ 0.15
PRPF18-202ENST00000378572 C16orf59Q7L2K0 433 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 OTOP2Q7RTS6 562 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 GAS2L1Q99501 681 aaPredicted RBP15.98■□□□□ 0.15
PRPF18-202ENST00000378572 SEZ6LQ9BYH1 1024 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 PBX4Q9BYU1 374 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 CPVLQ9H3G5 476 aa15.98■□□□□ 0.15
PRPF18-202ENST00000378572 WDR19Q8NEZ3 1342 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 KDM4AO75164 1064 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 FGBP02675 491 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 KRT32Q14532 448 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 SLC43A3Q8NBI5 491 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 CLEC4DQ8WXI8 215 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 PPM1EQ8WY54 764 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 NOC4LQ9BVI4 516 aaKnown RBP15.97■□□□□ 0.15
PRPF18-202ENST00000378572 TM6SF1Q9BZW5 370 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 UBA5Q9GZZ9 404 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 GRIN2DO15399 1336 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 LOC102724159A0A0B4J2E5 919 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 PWP2Q15269 919 aaKnown RBP15.97■□□□□ 0.15
PRPF18-202ENST00000378572 RAB30Q15771 203 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 CDC37Q16543 378 aaPredicted RBP15.97■□□□□ 0.15
PRPF18-202ENST00000378572 CCDC178Q5BJE1 867 aa15.97■□□□□ 0.15
PRPF18-202ENST00000378572 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
PRPF18-202ENST00000378572 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
PRPF18-202ENST00000378572 B4E1Z4 1266 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 CYP21A2P08686 494 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 IMMTQ16891 758 aaKnown RBP15.96■□□□□ 0.15
PRPF18-202ENST00000378572 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 SNX21Q969T3 373 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 SCLYQ96I15 445 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 TRMT13Q9NUP7 481 aaKnown RBP15.96■□□□□ 0.15
PRPF18-202ENST00000378572 NOD1Q9Y239 953 aa15.96■□□□□ 0.15
PRPF18-202ENST00000378572 TNKSO95271 1327 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 SUPT20HL2P0C7V6 817 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 SNHG28P0DPA3 235 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 CYP2C9P11712 490 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 RPUSD2Q8IZ73 545 aaKnown RBP15.95■□□□□ 0.14
PRPF18-202ENST00000378572 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 PPP1R13LQ8WUF5 828 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 HERVK_113Q902F9 699 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 NKX2-4Q9H2Z4 354 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 PRDM12Q9H4Q4 367 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 CXXC1Q9P0U4 656 aaPredicted RBP15.95■□□□□ 0.14
PRPF18-202ENST00000378572 EYSQ5T1H1 3165 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 CDH23Q9H251 3354 aa15.95■□□□□ 0.14
PRPF18-202ENST00000378572 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF18-202ENST00000378572 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
PRPF18-202ENST00000378572 PSMA5P28066 241 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 PURAQ00577 322 aaKnown RBP15.94■□□□□ 0.14
PRPF18-202ENST00000378572 TTLL4Q14679 1199 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 DEFB128Q7Z7B8 93 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 COPS5Q92905 334 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 ZSCAN10Q96SZ4 725 aaPredicted RBP15.94■□□□□ 0.14
PRPF18-202ENST00000378572 WNT8AQ9H1J5 351 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 VAT1LQ9HCJ6 419 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 ABCB11O95342 1321 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 PARP1P09874 1014 aaKnown RBP15.94■□□□□ 0.14
PRPF18-202ENST00000378572 IGFBP4P22692 258 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 ASPRV1Q53RT3 343 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 RASIP1Q5U651 963 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 SLC28A3Q9HAS3 691 aa15.94■□□□□ 0.14
PRPF18-202ENST00000378572 RBM47A0AV96 593 aaKnown RBP15.93■□□□□ 0.14
PRPF18-202ENST00000378572 BECN1Q14457 450 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 NBPF20Q3BBV1 942 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 SEPT14Q6ZU15 432 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 CHST3Q7LGC8 479 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 USP38Q8NB14 1042 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 IPO9Q96P70 1041 aaKnown RBP15.93■□□□□ 0.14
PRPF18-202ENST00000378572 KRT23Q9C075 422 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
PRPF18-202ENST00000378572 ST18O60284 1047 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 NT5C2P49902 561 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 RABGGTBP53611 331 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 MCF2L2Q86YR7 1114 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 ENAHQ8N8S7 591 aaPredicted RBP15.92■□□□□ 0.14
PRPF18-202ENST00000378572 RETREG2Q8NC44 543 aa15.92■□□□□ 0.14
PRPF18-202ENST00000378572 KPNA6O60684 536 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 EDNRBP24530 442 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 QRICH1Q2TAL8 776 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 IFIT1BQ5T764 474 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms