RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 STRNO43815 780 aa24.34■■□□□ 1.49
CBWD3-202ENST00000377342 EDIL3O43854 480 aa24.34■■□□□ 1.49
CBWD3-202ENST00000377342 FOSP01100 380 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-202ENST00000377342 TRIM47Q96LD4 638 aa24.34■■□□□ 1.49
CBWD3-202ENST00000377342 IVNS1ABPQ9Y6Y0 642 aa24.34■■□□□ 1.49
CBWD3-202ENST00000377342 WNT7AO00755 349 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 SREBF1P36956 1147 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 NONOQ15233 471 aaKnown RBP eCLIP24.33■■□□□ 1.49
CBWD3-202ENST00000377342 MORN1Q5T089 497 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 MCTP2Q6DN12 878 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 JMYQ8N9B5 988 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 IL31RAQ8NI17 732 aa24.33■■□□□ 1.49
CBWD3-202ENST00000377342 ZSCAN16Q9H4T2 348 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-202ENST00000377342 SOWAHBA6NEL2 793 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 POTEB2H3BUK9 544 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 TNPO2O14787 897 aaKnown RBP24.32■■□□□ 1.48
CBWD3-202ENST00000377342 COBLO75128 1261 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 INF2Q27J81 1249 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 TBCKQ8TEA7 893 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 PXMP2Q9NR77 195 aa24.32■■□□□ 1.48
CBWD3-202ENST00000377342 SLC15A5A6NIM6 579 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 PSMC4P43686 418 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 TOB1P50616 345 aaPredicted RBP24.31■■□□□ 1.48
CBWD3-202ENST00000377342 FCGRTP55899 365 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 UBXN2AP68543 259 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 MYSM1Q5VVJ2 828 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 RMDN3Q96TC7 470 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 BEGAINQ9BUH8 593 aa24.31■■□□□ 1.48
CBWD3-202ENST00000377342 ZNF792Q3KQV3 632 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 ZNF296Q8WUU4 475 aaPredicted RBP24.3■■□□□ 1.48
CBWD3-202ENST00000377342 USP6NLQ92738 828 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 CHAMP1Q96JM3 812 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 GJD2Q9UKL4 321 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 DDX49Q9Y6V7 483 aaKnown RBP24.3■■□□□ 1.48
CBWD3-202ENST00000377342 EIF2AK2P19525 551 aaKnown RBP24.3■■□□□ 1.48
CBWD3-202ENST00000377342 CD99L2Q8TCZ2 262 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 PDCD2LQ9BRP1 358 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 KIAA1217Q5T5P2 1943 aa24.3■■□□□ 1.48
CBWD3-202ENST00000377342 ALDH5A1P51649 535 aaPredicted RBP24.29■■□□□ 1.48
CBWD3-202ENST00000377342 ARHGAP4P98171 946 aa24.29■■□□□ 1.48
CBWD3-202ENST00000377342 NBR1Q14596 966 aa24.29■■□□□ 1.48
CBWD3-202ENST00000377342 PGM5Q15124 567 aa24.29■■□□□ 1.48
CBWD3-202ENST00000377342 DNERQ8NFT8 737 aa24.29■■□□□ 1.48
CBWD3-202ENST00000377342 HTTP42858 3142 aa24.29■■□□□ 1.48
CBWD3-202ENST00000377342 MAP2K5Q13163 448 aa24.28■■□□□ 1.48
CBWD3-202ENST00000377342 NEK8Q86SG6 692 aa24.28■■□□□ 1.48
CBWD3-202ENST00000377342 NSUN6Q8TEA1 469 aaKnown RBP24.28■■□□□ 1.48
CBWD3-202ENST00000377342 SOCS4Q8WXH5 440 aa24.28■■□□□ 1.48
CBWD3-202ENST00000377342 FKTNO75072 461 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 EDNRBP24530 442 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 FOXD4L6Q3SYB3 417 aaPredicted RBP24.27■■□□□ 1.48
CBWD3-202ENST00000377342 ARHGEF16Q5VV41 709 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 FOXD4L3Q6VB84 417 aaPredicted RBP24.27■■□□□ 1.48
CBWD3-202ENST00000377342 FTOQ9C0B1 505 aaKnown RBP eCLIP24.27■■□□□ 1.48
CBWD3-202ENST00000377342 EHMT1Q9H9B1 1298 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 HOXC6P09630 235 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 RILPL1Q5EBL4 403 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 NPLOC4Q8TAT6 608 aa24.27■■□□□ 1.48
CBWD3-202ENST00000377342 ADD3Q9UEY8 706 aaKnown RBP24.27■■□□□ 1.48
CBWD3-202ENST00000377342 TDP2O95551 362 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 CYP3A4P08684 503 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 TRAPPC10P48553 1259 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 MRPS9P82933 396 aaKnown RBP24.26■■□□□ 1.47
CBWD3-202ENST00000377342 PCNX4Q63HM2 1172 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 TNPO1Q92973 898 aaKnown RBP24.26■■□□□ 1.47
CBWD3-202ENST00000377342 NUDT12Q9BQG2 462 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 GABRQQ9UN88 632 aa24.26■■□□□ 1.47
CBWD3-202ENST00000377342 KIF22Q14807 665 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 LETM2Q2VYF4 491 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 TTC38Q5R3I4 469 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 DPP9Q86TI2 863 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 ERO1AQ96HE7 468 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 MAML3Q96JK9 1138 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 ZFP91Q96JP5 570 aaPredicted RBP24.25■■□□□ 1.47
CBWD3-202ENST00000377342 NOL7Q9UMY1 257 aaKnown RBP24.25■■□□□ 1.47
CBWD3-202ENST00000377342 PCDHB6Q9Y5E3 794 aa24.25■■□□□ 1.47
CBWD3-202ENST00000377342 NR3C2P08235 984 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 ATP2B1P20020 1258 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 USP11P51784 963 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 DNM1Q05193 864 aaKnown RBP24.24■■□□□ 1.47
CBWD3-202ENST00000377342 PRKCZQ05513 592 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 ZNF467Q7Z7K2 595 aaPredicted RBP24.24■■□□□ 1.47
CBWD3-202ENST00000377342 MORC4Q8TE76 937 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 USP28Q96RU2 1077 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 APBA2Q99767 749 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 DIS3Q9Y2L1 958 aaKnown RBP24.24■■□□□ 1.47
CBWD3-202ENST00000377342 FAM86B1E9PN63 330 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 FAM86B2P0C5J1 330 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 CIITAP33076 1130 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 RGS2P41220 211 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 VSIG10LQ86VR7 867 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 MBOAT7Q96N66 472 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 IWS1Q96ST2 819 aa24.24■■□□□ 1.47
CBWD3-202ENST00000377342 IGLV3-22A0A075B6J6 115 aa24.23■■□□□ 1.47
CBWD3-202ENST00000377342 MOXD1Q6UVY6 613 aa24.23■■□□□ 1.47
CBWD3-202ENST00000377342 CYP2W1Q8TAV3 490 aa24.23■■□□□ 1.47
CBWD3-202ENST00000377342 LENG9Q96B70 501 aa24.23■■□□□ 1.47
CBWD3-202ENST00000377342 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.23■■□□□ 1.47
CBWD3-202ENST00000377342 FLRT1Q9NZU1 646 aa24.23■■□□□ 1.47
CBWD3-202ENST00000377342 LOC102724159A0A0B4J2E5 919 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms