RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 RPGRIP1Q96KN7 1286 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 HESX1Q9UBX0 185 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 COPB1P53618 953 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 RCAN1P53805 252 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 POLR2FP61218 127 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 SEPT2Q15019 361 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 ARL6IP4Q66PJ3 421 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 RSPH3Q86UC2 560 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 XPOTO43592 962 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 ZNF500O60304 480 aaPredicted RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 EEF1GP26641 437 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 EXOC3L4Q17RC7 722 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM76AQ8TAV0 307 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 SLC10A4Q96EP9 437 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 PPM1EQ8WY54 764 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 CNOT6LQ96LI5 555 aaKnown RBP19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 MMS19Q96T76 1030 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 VPS18Q9P253 973 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 ANKFY1Q9P2R3 1169 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 PNMA3Q9UL41 463 aa19.63■□□□□ 0.73
CLSTN1-202ENST00000377298 AP3B2Q13367 1082 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 RABL6Q3YEC7 729 aaPredicted RBP19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 CPLX4Q7Z7G2 160 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 CCDC105Q8IYK2 499 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 CAPN2P17655 700 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 ACCSQ96QU6 501 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 NBPF11Q86T75 865 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 P2RX5Q93086 422 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 CEP170P1Q96L14 293 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 TDRD3Q9H7E2 651 aaKnown RBP19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 UTYO14607 1347 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 LARGE1O95461 756 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 NR2F2P24468 414 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 RESTQ13127 1097 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 PPP1R21Q6ZMI0 780 aa19.62■□□□□ 0.73
CLSTN1-202ENST00000377298 ATP2C2O75185 946 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 BPIFB4P59827 614 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 TBC1D10CQ8IV04 446 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 KLHL7Q8IXQ5 586 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 ANO3Q9BYT9 981 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM184BQ9ULE4 1060 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 SPATA31A1Q5TZJ5 1347 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 IKBKBO14920 756 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 CYP2D6P10635 497 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 POLR2BP30876 1174 aaKnown RBP19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM193BQ96PV7 902 aaPredicted RBP19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 TMEM206Q9H813 350 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 ABCB4P21439 1286 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 PSMC2P35998 433 aaKnown RBP19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 CACNB3P54284 484 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 PAK2Q13177 524 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 ZNF658Q5TYW1 1059 aaPredicted RBP19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 HAUS4Q9H6D7 363 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 KMT5AQ9NQR1 393 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 SAR1BQ9Y6B6 198 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 GPSM2P81274 684 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 UAP1Q16222 522 aaPredicted RBP19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 SMC6Q96SB8 1091 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 PSMB7Q99436 277 aa19.61■□□□□ 0.73
CLSTN1-202ENST00000377298 PLEKHA8P1O95397 391 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 H2AFZP0C0S5 128 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 FKBP3Q00688 224 aaKnown RBP19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 UBE2SQ16763 222 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 H2AFVQ71UI9 128 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 TMEM47Q9BQJ4 181 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 TRIM31Q9BZY9 425 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 ZEB2O60315 1214 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 MED10Q9BTT4 135 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 SUGT1Q9Y2Z0 365 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 BZW2Q9Y6E2 419 aaKnown RBP19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 ADAMTS13Q76LX8 1427 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 ZFP91Q96JP5 570 aaPredicted RBP19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 STK36Q9NRP7 1315 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 PPP2R5EQ16537 467 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 HADHQ16836 314 aaKnown RBP19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 RAB3IL1Q8TBN0 382 aa19.6■□□□□ 0.73
CLSTN1-202ENST00000377298 ZBTB7AO95365 584 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 MYL7Q01449 175 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 NT5C1BQ96P26 610 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 RIPOR2Q9Y4F9 1068 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 PSAPP07602 524 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 PSMD2Q13200 908 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 TDRD7Q8NHU6 1098 aaKnown RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 TRIM7Q9C029 511 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 AKT3Q9Y243 479 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 PCDHB6Q9Y5E3 794 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 MFAP3P55082 362 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 LACTBP83111 547 aaPredicted RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 DNAJC21Q5F1R6 531 aaKnown RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 SAMD15Q9P1V8 674 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 ZBTB5O15062 677 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 ZBTB24O43167 697 aaPredicted RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.739e-8■■■□□ 15.2
CLSTN1-202ENST00000377298 INO80B-WBP1J3KQ70 363 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms