RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 GDF15Q99988 308 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
UBD-203ENST00000377050 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 CSADQ9Y600 493 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
UBD-203ENST00000377050 CLRN2A0PK11 232 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 SGPL1O95470 568 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 CCDC175P0C221 793 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 KIF5BP33176 963 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 PSMC4P43686 418 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 CNGA4Q8IV77 575 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
UBD-203ENST00000377050 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 RWDD2AQ9UIY3 292 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 MINPP1Q9UNW1 487 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 MYH13Q9UKX3 1938 aa12.5□□□□□ -0.41
UBD-203ENST00000377050 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
UBD-203ENST00000377050 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
UBD-203ENST00000377050 TUBBP07437 444 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 SCG2P13521 617 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 COL9A1P20849 921 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 OSBPP22059 807 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 GTF2IP78347 998 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 RASA3Q14644 834 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 TERF2Q15554 542 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 SPTY2D1Q68D10 685 aaPredicted RBP12.49□□□□□ -0.41
UBD-203ENST00000377050 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 RASGRP2Q7LDG7 609 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 PPFIBP1Q86W92 1011 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 TMTC1Q8IUR5 882 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 SDR42E1Q8WUS8 393 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
UBD-203ENST00000377050 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 DHX58Q96C10 678 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
UBD-203ENST00000377050 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
UBD-203ENST00000377050 LAD1O00515 517 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 PPP1R2P41236 205 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 KCNB1Q14721 858 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 ZNF658Q5TYW1 1059 aaPredicted RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 ANKRD20A12PQ8NF67 263 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 ZNF446Q9NWS9 450 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
UBD-203ENST00000377050 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
UBD-203ENST00000377050 A0A087X0B3 334 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 SNAP23O00161 211 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 MFAP3LO75121 409 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 PRPHP41219 470 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 GYG1P46976 350 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 RBM5P52756 815 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBD-203ENST00000377050 GNG11P61952 73 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 VGLL4Q14135 290 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 BRD3Q15059 726 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
UBD-203ENST00000377050 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 NECAB2Q7Z6G3 386 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 C7orf61Q8IZ16 206 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 IGSF22Q8N9C0 903 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 CUEDC2Q9H467 287 aa12.47□□□□□ -0.41
UBD-203ENST00000377050 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms