RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C7orf43Q8WVR3 580 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 MKL1Q969V6 931 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 EFCAB8A8MWE9 144 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 RXRBP28702 533 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
MSH5-202ENST00000375740 MRPL12P52815 198 aaKnown RBP15.63■□□□□ 0.09
MSH5-202ENST00000375740 STIM1Q13586 685 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 MTF1Q14872 753 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 CUL5Q93034 780 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 FUT8Q9BYC5 575 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 KANSL2Q9H9L4 492 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 RRP15Q9Y3B9 282 aaKnown RBP15.63■□□□□ 0.09
MSH5-202ENST00000375740 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 PHLPP2Q6ZVD8 1323 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 GYPCP04921 128 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 ASIC1P78348 528 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 PDE4DQ08499 809 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 GRB10Q13322 594 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SEPT2Q15019 361 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 DESI2Q9BSY9 194 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SRRTQ9BXP5 876 aaKnown RBP15.62■□□□□ 0.09
MSH5-202ENST00000375740 TDRD3Q9H7E2 651 aaKnown RBP15.62■□□□□ 0.09
MSH5-202ENST00000375740 PSTPIP2Q9H939 334 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 NYAP2Q9P242 653 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SOWAHDA6NJG2 315 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 PSMA7O14818 248 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 MFAP3LO75121 409 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 FXR1P51114 621 aaKnown RBP eCLIP15.62■□□□□ 0.09
MSH5-202ENST00000375740 AMPD3Q01432 767 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 GPS2Q13227 327 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 TMEM266Q2M3C6 531 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SLFN13Q68D06 897 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 TATDN1Q6P1N9 297 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 CCDC47Q96A33 483 aaKnown RBP15.62■□□□□ 0.09
MSH5-202ENST00000375740 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 PARD6BQ9BYG5 372 aa15.62■□□□□ 0.09
MSH5-202ENST00000375740 SLC1A4P43007 532 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 STK4Q13043 487 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 PDIA5Q14554 519 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 DHTKD1Q96HY7 919 aaPredicted RBP15.61■□□□□ 0.09
MSH5-202ENST00000375740 WDR24Q96S15 920 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 ZNF646O15015 1829 aaPredicted RBP15.61■□□□□ 0.09
MSH5-202ENST00000375740 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 PPP4R3AQ6IN85 833 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 RAD9BQ6WBX8 426 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 NUDT12Q9BQG2 462 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 BLOC1S4Q9NUP1 217 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 POTEMA6NI47 508 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 ANKRD65E5RJM6 399 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 RNF225M0QZC1 329 aaPredicted RBP15.61■□□□□ 0.09
MSH5-202ENST00000375740 NPM3O75607 178 aaKnown RBP15.61■□□□□ 0.09
MSH5-202ENST00000375740 GDF11O95390 407 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 FCER1AP12319 257 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 UBXN1Q04323 297 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 SLC15A2Q16348 729 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 TTI2Q6NXR4 508 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 SV2BQ7L1I2 683 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 DCAF4Q8WV16 495 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 NAA15Q9BXJ9 866 aaKnown RBP15.61■□□□□ 0.09
MSH5-202ENST00000375740 THAP9Q9H5L6 903 aa15.61■□□□□ 0.09
MSH5-202ENST00000375740 GOLGA6L9A6NEM1 432 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 TPM1P09493 284 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 MCM6Q14566 821 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 GOLGA5Q8TBA6 731 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 PRMT6Q96LA8 375 aaPredicted RBP15.6■□□□□ 0.09
MSH5-202ENST00000375740 DUSP9Q99956 384 aaKnown RBP15.6■□□□□ 0.09
MSH5-202ENST00000375740 RAB34Q9BZG1 259 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 DDX25Q9UHL0 483 aaKnown RBP15.6■□□□□ 0.09
MSH5-202ENST00000375740 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
MSH5-202ENST00000375740 ATP8B1O43520 1251 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 HAS1Q92839 578 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 HPS3Q969F9 1004 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 GJA10Q969M2 543 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 CDK5RAP3Q96JB5 506 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 PCDHA1Q9Y5I3 950 aa15.6■□□□□ 0.09
MSH5-202ENST00000375740 MYH7BA7E2Y1 1941 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 YDJCA8MPS7 323 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L15C9J2P7 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L13C9JLJ4 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L11C9JVI0 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L18D6R9N7 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L22D6RA61 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L17D6RBQ6 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L19D6RCP7 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L20D6RJB6 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 EEF1GP26641 437 aaKnown RBP15.59■□□□□ 0.09
MSH5-202ENST00000375740 ICA1Q05084 483 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L24Q0WX57 530 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
MSH5-202ENST00000375740 ABCB5Q2M3G0 1257 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 ANKRD40Q6AI12 368 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 TMEM179Q6ZVK1 233 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 P2RX5Q93086 422 aa15.59■□□□□ 0.09
MSH5-202ENST00000375740 CCDC51Q96ER9 411 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms