RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 ARHGEF16Q5VV41 709 aa23.16■■□□□ 1.3
C6orf48-205ENST00000375640 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
C6orf48-205ENST00000375640 LRRC2Q9BYS8 371 aa23.16■■□□□ 1.3
C6orf48-205ENST00000375640 REC8O95072 547 aa23.15■■□□□ 1.3
C6orf48-205ENST00000375640 CDK7P50613 346 aa23.15■■□□□ 1.3
C6orf48-205ENST00000375640 MDM2Q00987 491 aaPredicted RBP23.15■■□□□ 1.3
C6orf48-205ENST00000375640 STXBP2Q15833 593 aa23.15■■□□□ 1.3
C6orf48-205ENST00000375640 FANCBQ8NB91 859 aa23.15■■□□□ 1.3
C6orf48-205ENST00000375640 RRP36Q96EU6 259 aaKnown RBP23.15■■□□□ 1.3
C6orf48-205ENST00000375640 UBE2OQ9C0C9 1292 aaKnown RBP23.15■■□□□ 1.3
C6orf48-205ENST00000375640 SMCHD1A6NHR9 2005 aa23.15■■□□□ 1.3
C6orf48-205ENST00000375640 A0A0U1RQG5 324 aaPredicted RBP23.14■■□□□ 1.29
C6orf48-205ENST00000375640 DCDC2CA8MYV0 355 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 GCOM1H8Y6P7 765 aaPredicted RBP23.14■■□□□ 1.29
C6orf48-205ENST00000375640 PQBP1O60828 265 aaKnown RBP23.14■■□□□ 1.29
C6orf48-205ENST00000375640 POLR2MP0CAP2 368 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 HSPA4P34932 840 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 TTLL4Q14679 1199 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 PPP2R5BQ15173 497 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 ADCK5Q3MIX3 580 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 PRDM5Q9NQX1 630 aaPredicted RBP23.14■■□□□ 1.29
C6orf48-205ENST00000375640 PDLIM7Q9NR12 457 aa23.14■■□□□ 1.29
C6orf48-205ENST00000375640 MROH7Q68CQ1 1323 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 ARVCFO00192 962 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 EPB41L2O43491 1005 aaKnown RBP23.13■■□□□ 1.29
C6orf48-205ENST00000375640 EIF3JO75822 258 aaKnown RBP23.13■■□□□ 1.29
C6orf48-205ENST00000375640 NR3C2P08235 984 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 CLTBP09497 229 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 PTGS1P23219 599 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 CXCL17Q6UXB2 119 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 SRBD1Q8N5C6 995 aaKnown RBP23.13■■□□□ 1.29
C6orf48-205ENST00000375640 SEZ6LQ9BYH1 1024 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 PXMP2Q9NR77 195 aa23.13■■□□□ 1.29
C6orf48-205ENST00000375640 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 TRIM43BA6NCK2 446 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 PLEKHA8P1O95397 391 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 TXNP10599 105 aaKnown RBP23.12■■□□□ 1.29
C6orf48-205ENST00000375640 EIF2AK2P19525 551 aaKnown RBP23.12■■□□□ 1.29
C6orf48-205ENST00000375640 RXRAP19793 462 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 CPT1AP50416 773 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 BRDTQ58F21 947 aaPredicted RBP23.12■■□□□ 1.29
C6orf48-205ENST00000375640 SH3RF1Q7Z6J0 888 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 PIBF1Q8WXW3 757 aa23.12■■□□□ 1.29
C6orf48-205ENST00000375640 TRIM43Q96BQ3 446 aaPredicted RBP23.12■■□□□ 1.29
C6orf48-205ENST00000375640 SEC63Q9UGP8 760 aaKnown RBP23.12■■□□□ 1.29
C6orf48-205ENST00000375640 KIAA0355O15063 1070 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 HOXA13P31271 388 aaPredicted RBP23.11■■□□□ 1.29
C6orf48-205ENST00000375640 FAAP100Q0VG06 881 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 CCDC62Q6P9F0 684 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 TDHQ8IZJ6 230 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 OR6J1Q8NGC5 347 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 TMEM39AQ9NV64 488 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 POLR3EQ9NVU0 708 aa23.11■■□□□ 1.29
C6orf48-205ENST00000375640 SEPT14Q6ZU15 432 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 VSIG10LQ86VR7 867 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 MICU3Q86XE3 530 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 SLC43A3Q8NBI5 491 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 TCEANC2Q96MN5 208 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 PDCD2LQ9BRP1 358 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 ALPK3Q96L96 1907 aa23.1■■□□□ 1.29
C6orf48-205ENST00000375640 KPNA6O60684 536 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 ITGA7Q13683 1181 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 TMTC3Q6ZXV5 915 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 RAB11FIP4Q86YS3 637 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 CMTR1Q8N1G2 835 aaKnown RBP23.09■■□□□ 1.29
C6orf48-205ENST00000375640 BADQ92934 168 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 RBM28Q9NW13 759 aaKnown RBP23.09■■□□□ 1.29
C6orf48-205ENST00000375640 PCDH10Q9P2E7 1040 aa23.09■■□□□ 1.29
C6orf48-205ENST00000375640 A6NJR5 290 aa23.08■■□□□ 1.29
C6orf48-205ENST00000375640 ARIH2O95376 493 aa23.08■■□□□ 1.29
C6orf48-205ENST00000375640 FCHSD1Q86WN1 690 aa23.08■■□□□ 1.29
C6orf48-205ENST00000375640 COPS5Q92905 334 aa23.08■■□□□ 1.29
C6orf48-205ENST00000375640 JAKMIP1Q96N16 626 aaKnown RBP23.08■■□□□ 1.29
C6orf48-205ENST00000375640 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.29
C6orf48-205ENST00000375640 TLR3O15455 904 aaKnown RBP23.07■■□□□ 1.28
C6orf48-205ENST00000375640 ZBTB43O43298 467 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 MYCLP12524 364 aaPredicted RBP23.07■■□□□ 1.28
C6orf48-205ENST00000375640 RAG1P15918 1043 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 PSMA5P28066 241 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 RCAN1P53805 252 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 FGD1P98174 961 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 PGM5Q15124 567 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 LRIT3Q3SXY7 679 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 KCNV1Q6PIU1 500 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 FAM126BQ8IXS8 530 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 CUL5Q93034 780 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 DDX41Q9UJV9 622 aaKnown RBP23.07■■□□□ 1.28
C6orf48-205ENST00000375640 GRIN2DO15399 1336 aa23.07■■□□□ 1.28
C6orf48-205ENST00000375640 PIK3CDO00329 1044 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 GH1P01241 217 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 MYL3P08590 195 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 ITGB8P26012 769 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 PURAQ00577 322 aaKnown RBP23.06■■□□□ 1.28
C6orf48-205ENST00000375640 RTN1Q16799 776 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 LY6KQ17RY6 165 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 FBXL16Q8N461 479 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 CCDC82Q8N4S0 544 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms