RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 SKAP2O75563 359 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-203ENST00000375315 PPP1R37O75864 691 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 BAG3O95817 575 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
C9orf3-203ENST00000375315 TRAF1Q13077 416 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 WTAPQ15007 396 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 POSTNQ15063 836 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 CCT8L2Q96SF2 557 aa13.47□□□□□ -0.25
C9orf3-203ENST00000375315 KIF28PB7ZC32 967 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 PBX1P40424 430 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 PTGISQ16647 500 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 SPECC1Q5M775 1068 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 NLRP14Q86W24 1093 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 PES1O00541 588 aaKnown RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ZBTB43O43298 467 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 PPP1R12BO60237 982 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 SNUPNO95149 360 aaKnown RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ATP1A1P05023 1023 aaKnown RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 EPHB4P54760 987 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ERVK-24P63145 666 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 NNTQ13423 1086 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 MYCBPAPQ8TBZ2 947 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 JAKMIP2Q96AA8 810 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 STX8Q9UNK0 236 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-203ENST00000375315 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
C9orf3-203ENST00000375315 SRRM3A6NNA2 597 aaPredicted RBP13.46□□□□□ -0.26
C9orf3-203ENST00000375315 SRGAP2O75044 1071 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 FAM107AO95990 144 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 GYPCP04921 128 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 PEX19P40855 299 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 FXR1P51114 621 aaKnown RBP eCLIP13.46□□□□□ -0.26
C9orf3-203ENST00000375315 MORC3Q14149 939 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 EMBQ6PCB8 327 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 SLC26A6Q9BXS9 759 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.26
C9orf3-203ENST00000375315 BCS1LQ9Y276 419 aa13.46□□□□□ -0.26
C9orf3-203ENST00000375315 TNKSO95271 1327 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 EME2A4GXA9 379 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 ECE2O60344 883 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 APBA1Q02410 837 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 RRP36Q96EU6 259 aaKnown RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 ABHD10Q9NUJ1 306 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 HDLBPQ00341 1268 aaKnown RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 APOA5Q6Q788 366 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 TAX1BP1Q86VP1 789 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 ESR2Q92731 530 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 NUCKS1Q9H1E3 243 aaKnown RBP13.45□□□□□ -0.26
C9orf3-203ENST00000375315 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
C9orf3-203ENST00000375315 FOXN1O15353 648 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 IPO7O95373 1038 aaKnown RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 GUCY1A3Q02108 690 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 TRIM14Q14142 442 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 NT5DC1Q5TFE4 455 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 LARGE2Q8N3Y3 721 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 NUP88Q99567 741 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 KRT23Q9C075 422 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 HAUS2Q9NVX0 235 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 LDHCP07864 332 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 TFAP4Q01664 338 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 APTXQ7Z2E3 356 aaKnown RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 SH2D3CQ8N5H7 860 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 USP40Q9NVE5 1235 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 BAZ2AQ9UIF9 1905 aaKnown RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 PTPAQ15257 358 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 CDCA2Q69YH5 1023 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 RNF41Q9H4P4 317 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-203ENST00000375315 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
C9orf3-203ENST00000375315 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 E7EVH7 732 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms