RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 KIF2CQ99661 725 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 FRMPD1Q5SYB0 1578 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 TMEM110-MUSTN1A8MSY1 372 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 IL2RBP14784 551 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 TRIM33Q9UPN9 1127 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 MAP3K19Q56UN5 1328 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 AP2B1P63010 937 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 MFAP3P55082 362 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 RESP18Q5W5W9 173 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 KRT37O76014 449 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 UAP1Q16222 522 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-204ENST00000375290 EPB41L5Q9HCM4 733 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 GCNT3O95395 438 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 DR1Q01658 176 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 SPARCL1Q14515 664 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 ATP6V1G3Q96LB4 118 aa11.07□□□□□ -0.64
PTCH1-204ENST00000375290 STXBP3O00186 592 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CCND1P24385 295 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PEX19P40855 299 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 KLC4Q9NSK0 619 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 BAG5Q9UL15 447 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 ERVV-2B6SEH9 535 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 TAF5LO75529 589 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CCNE1P24864 410 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CENPUQ71F23 418 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 LRRC37BQ96QE4 947 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 MYO1FO00160 1098 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 SRGAP2BP0DMP2 458 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 SERPINB6P35237 376 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 SCRN1Q12765 414 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 FSCBQ5H9T9 825 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PARP9Q8IXQ6 854 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PDCD7Q8N8D1 485 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 TRIM55Q9BYV6 548 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 GUCY2FP51841 1108 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 BYSLQ13895 437 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 FAM26FQ5R3K3 315 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CAPRIN2Q6IMN6 1127 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 KRT28Q7Z3Y7 464 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CTAGE3PQ8IX95 158 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 LSM14BQ9BX40 385 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PTK2Q05397 1052 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PPARAQ07869 468 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 RBL2Q08999 1139 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 HIBCHQ6NVY1 386 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 CWF19L2Q2TBE0 894 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 DPCR1Q3MIW9 517 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 PAIP2BQ9ULR5 123 aaKnown RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 TXNDC9O14530 226 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 ARL1P40616 181 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-204ENST00000375290 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
PTCH1-204ENST00000375290 TBCCQ15814 346 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 DESI2Q9BSY9 194 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ABHD10Q9NUJ1 306 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ANGPTL3Q9Y5C1 460 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 RIBC1Q8N443 379 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 NSUN7Q8NE18 718 aaKnown RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CEP72Q9P209 647 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 FAM187AA6NFU0 413 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 JAK2O60674 1132 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CCDC117Q8IWD4 279 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 MAP3K15Q6ZN16 1313 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 NEURL1BA8MQ27 555 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 SERPINB10P48595 397 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CHMP6Q96FZ7 201 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 MAN1A2O60476 641 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ITGA6P23229 1130 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 PPP2R2AP63151 447 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ADAM9Q13443 819 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 KLHL38Q2WGJ6 581 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ENAHQ8N8S7 591 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 SMG5Q9UPR3 1016 aaKnown RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 SPAG7O75391 227 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 TADA3O75528 432 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 AFPP02771 609 aaKnown RBP11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CHRNA3P32297 505 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 EPN3Q9H201 632 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 CCDC22O60826 627 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 MMEP08473 750 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
PTCH1-204ENST00000375290 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms