RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 CLEC10AQ8IUN9 316 aa12.94□□□□□ -0.34
ABCA1-201ENST00000374733 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
ABCA1-201ENST00000374733 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
ABCA1-201ENST00000374733 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
ABCA1-201ENST00000374733 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
ABCA1-201ENST00000374733 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
ABCA1-201ENST00000374733 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 TNKSO95271 1327 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 TRIP12Q14669 1992 aaPredicted RBP12.93□□□□□ -0.34
ABCA1-201ENST00000374733 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 ARID4AP29374 1257 aaPredicted RBP12.93□□□□□ -0.34
ABCA1-201ENST00000374733 RFC2P35250 354 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 COPB2P35606 906 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 TFCP2Q12800 502 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
ABCA1-201ENST00000374733 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
ABCA1-201ENST00000374733 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 ATG2AQ2TAZ0 1938 aa12.93□□□□□ -0.34
ABCA1-201ENST00000374733 PROB1E7EW31 1015 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 VWA5AO00534 786 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 ACACBO00763 2458 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
ABCA1-201ENST00000374733 NKX3-2P78367 333 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 DEFB103AP81534 67 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 TCEAL5Q5H9L2 206 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 CNTNAP3BQ96NU0 1288 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 CNTNAP3Q9BZ76 1288 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 CLDND1Q9NY35 253 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 SLC27A5Q9Y2P5 690 aa12.92□□□□□ -0.34
ABCA1-201ENST00000374733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
ABCA1-201ENST00000374733 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
ABCA1-201ENST00000374733 ZEB2O60315 1214 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 IQCF3P0C7M6 154 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 PLCD1P51178 756 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 BANK1Q8NDB2 785 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
ABCA1-201ENST00000374733 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
ABCA1-201ENST00000374733 FGD4Q96M96 766 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 C17orf80Q9BSJ5 609 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 AP5M1Q9H0R1 490 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 ADAMTS5Q9UNA0 930 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 ZNF292O60281 2723 aa12.91□□□□□ -0.34
ABCA1-201ENST00000374733 PKD1L2Q7Z442 2459 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 CHD6Q8TD26 2715 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.34
ABCA1-201ENST00000374733 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
ABCA1-201ENST00000374733 PTPROQ16827 1216 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
ABCA1-201ENST00000374733 FAM117BQ6P1L5 589 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 KATNBL1Q9H079 304 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 NLRC5Q86WI3 1866 aa12.9□□□□□ -0.34
ABCA1-201ENST00000374733 STXBP3O00186 592 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 GJB5O95377 273 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
ABCA1-201ENST00000374733 FDX1P10109 184 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 AVPR2P30518 371 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 ZXDAP98168 799 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 ADSSL1Q8N142 457 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 RAD9AQ99638 391 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 TEX13BQ9BXU2 312 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 CTNNA3Q9UI47 895 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 GNEQ9Y223 722 aaKnown RBP12.89□□□□□ -0.35
ABCA1-201ENST00000374733 RIPK3Q9Y572 518 aa12.89□□□□□ -0.35
ABCA1-201ENST00000374733 ATRXP46100 2492 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 MBTPS2O43462 519 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 RAD21O60216 631 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 CYP7A1P22680 504 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 ICA1Q05084 483 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 TMEM179Q6ZVK1 233 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 DGLUCYQ7Z3D6 616 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
ABCA1-201ENST00000374733 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
ABCA1-201ENST00000374733 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms