RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CYP3A4P08684 503 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 FAM86B2P0C5J1 330 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 PPIL2Q13356 520 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 PNOCQ13519 176 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 TMEM132BQ14DG7 1078 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 ARMC9Q7Z3E5 817 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 SH3RF1Q7Z6J0 888 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 RNF214Q8ND24 703 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 CNNM3Q8NE01 707 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 KCNMB3Q9NPA1 279 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 TUBE1Q9UJT0 475 aa17.78■□□□□ 0.44
NIPAL3-204ENST00000374399 CXCL11O14625 94 aa17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 ALAS1P13196 640 aa17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 FXR2P51116 673 aaKnown RBP eCLIP17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 DHX58Q96C10 678 aa17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 MMTAG2Q9BU76 263 aaKnown RBP17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 CCSER1Q9C0I3 900 aa17.77■□□□□ 0.44
NIPAL3-204ENST00000374399 MYPNQ86TC9 1320 aa17.77■□□□□ 0.43
NIPAL3-204ENST00000374399 ATP2A1O14983 1001 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 TECP42680 631 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 TXKP42681 527 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 OAZ1P54368 228 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 Q4G0T1 1027 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 NAALADL2Q58DX5 795 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 PDXDC2PQ6P474 469 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 CYP2W1Q8TAV3 490 aa17.76■□□□□ 0.43
NIPAL3-204ENST00000374399 IGLV3-22A0A075B6J6 115 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 SLFN14P0C7P3 912 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 PROCA1Q8NCQ7 364 aaPredicted RBP17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 AK8Q96MA6 479 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 MTRQ99707 1265 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 SASS6Q6UVJ0 657 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 HOXC10Q9NYD6 342 aa17.75■□□□□ 0.43
NIPAL3-204ENST00000374399 LCTP09848 1927 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 PEX10O60683 326 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 SARSP49591 514 aaKnown RBP17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 UBXN2AP68543 259 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 POSTNQ15063 836 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 GPAT2Q6NUI2 795 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 PAGE5Q96GU1 130 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 TTC12Q9H892 705 aaPredicted RBP17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 ZNF408Q9H9D4 720 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 DISC1Q9NRI5 854 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 PNMA2Q9UL42 364 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 PCDHA5Q9Y5H7 936 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 FRMPD4Q14CM0 1322 aa17.74■□□□□ 0.43
NIPAL3-204ENST00000374399 POTEMA6NI47 508 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 RPS6P62753 249 aaKnown RBP17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 PDIA5Q14554 519 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 PRR16Q569H4 304 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 NT5DC1Q5TFE4 455 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 GADL1Q6ZQY3 521 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 SPATA20Q8TB22 786 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 NUDT12Q9BQG2 462 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 DNAJC25Q9H1X3 360 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
NIPAL3-204ENST00000374399 UNCXA6NJT0 531 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 IQUBQ8NA54 791 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 PURBQ96QR8 312 aaKnown RBP17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 MAP3K20Q9NYL2 800 aaKnown RBP17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 BTBD7Q9P203 1132 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 USP25Q9UHP3 1055 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 MSH4O15457 936 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 ITGBL1O95965 494 aaPredicted RBP17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 BMP6P22004 513 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 CASP1P29466 404 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 UBA7P41226 1012 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 STX1AQ16623 288 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 DPCR1Q3MIW9 517 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 CABP7Q86V35 215 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 SAMD3Q8N6K7 520 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 PNMA5Q96PV4 448 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 TAAR1Q96RJ0 339 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 CBX8Q9HC52 389 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
NIPAL3-204ENST00000374399 CTDP1Q9Y5B0 961 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms