RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CIITAP33076 1130 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 AFMP43652 599 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 RBM5P52756 815 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 ICA1Q05084 483 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 TNIP1Q15025 636 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 DLGAP5Q15398 846 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 Q4G0T1 1027 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 SPECC1Q5M775 1068 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 SLFN13Q68D06 897 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 USP49Q70CQ1 688 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 UNC13DQ70J99 1090 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 ZSCAN29Q8IWY8 852 aaPredicted RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 GUF1Q8N442 669 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 GPR101Q96P66 508 aaPredicted RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 TRIM9Q9C026 710 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 DDX4Q9NQI0 724 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 EXOC1Q9NV70 894 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 PCDHA12Q9UN75 941 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 MYH8P13535 1937 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 F5H6K3 240 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 MARCH6O60337 910 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 BMP3P12645 472 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 PBX1P40424 430 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ETF1P62495 437 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 KLRC3Q07444 240 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ARID5BQ14865 1188 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 IL17AQ16552 155 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 NAALADL2Q58DX5 795 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ARMCX5Q6P1M9 558 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ZNF662Q6ZS27 426 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ILDR2Q71H61 639 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 FBXO11Q86XK2 927 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 HOMER1Q86YM7 354 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 KIAA0825Q8IV33 1275 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ZNF397Q8NF99 534 aaPredicted RBP9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 GMLQ99445 158 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 KCND2Q9NZV8 630 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 FAM198AQ9UFP1 575 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 DDX25Q9UHL0 483 aaKnown RBP9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 PCDHA1Q9Y5I3 950 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 PSME4Q14997 1843 aa9.76□□□□□ -0.85
SNRNP40-202ENST00000373720 A0A087X0B3 334 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 SPDYE3A6NKU9 549 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 N4BP3O15049 544 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 ASNSP08243 561 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 CCDC175P0C221 793 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 GOLGA8HP0CJ92 632 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 ATP1A3P13637 1013 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 SCNN1DP51172 638 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 CDK17Q00537 523 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 SLC35G1Q2M3R5 365 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 CENPPQ6IPU0 288 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 NELFBQ8WX92 580 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 LARP4BQ92615 738 aaKnown RBP9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 LPAR1Q92633 364 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 ERCC4Q92889 916 aaPredicted RBP9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 TSG101Q99816 390 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 DBNDD1Q9H9R9 158 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 FEM1BQ9UK73 627 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 LTBP3Q9NS15 1303 aa9.75□□□□□ -0.85
SNRNP40-202ENST00000373720 A0A1W2PQJ5 194 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KCNJ18B7U540 433 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 FOXN1O15353 648 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KLRC4O43908 158 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 PLCG1P19174 1290 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 SREBF1P36956 1147 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 TECP42680 631 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 STAT2P52630 851 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 GHRHRQ02643 423 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 LRMPQ12912 555 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KCNJ12Q14500 433 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KARSQ15046 597 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KMT5BQ4FZB7 885 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 TMEM119Q4V9L6 283 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 SYDE2Q5VT97 1194 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 E4F1Q66K89 784 aaPredicted RBP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 CYP26C1Q6V0L0 522 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 APTXQ7Z2E3 356 aaKnown RBP9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 MCF2L2Q86YR7 1114 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 CCDC65Q8IXS2 484 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 NIM1KQ8IY84 436 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 CCDC170Q8IYT3 715 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
SNRNP40-202ENST00000373720 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms