RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CCL14Q16627 93 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 TRMT44Q8IYL2 757 aaKnown RBP23.4■■□□□ 1.34
SYNC-201ENST00000373484 SH3TC2Q8TF17 1288 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 ARMC5Q96C12 935 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 CCDC94Q9BW85 323 aaPredicted RBP23.4■■□□□ 1.34
SYNC-201ENST00000373484 SEC63Q9UGP8 760 aaKnown RBP23.4■■□□□ 1.34
SYNC-201ENST00000373484 DIS3Q9Y2L1 958 aaKnown RBP23.4■■□□□ 1.34
SYNC-201ENST00000373484 PCDHA1Q9Y5I3 950 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 GJB2P29033 226 aa23.39■■□□□ 1.33
SYNC-201ENST00000373484 ZNF792Q3KQV3 632 aa23.39■■□□□ 1.33
SYNC-201ENST00000373484 NCOA5Q9HCD5 579 aaKnown RBP23.39■■□□□ 1.33
SYNC-201ENST00000373484 CYP39A1Q9NYL5 469 aa23.39■■□□□ 1.33
SYNC-201ENST00000373484 MRPL11Q9Y3B7 192 aaKnown RBP23.39■■□□□ 1.33
SYNC-201ENST00000373484 NTRK3Q16288 839 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 DNTTIP2Q5QJE6 756 aaKnown RBP23.38■■□□□ 1.33
SYNC-201ENST00000373484 NSMFQ6X4W1 530 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 FLRT1Q9NZU1 646 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 HMGCRP04035 888 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 STK3Q13188 491 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 RGS22Q8NE09 1264 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 ABHD8Q96I13 439 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 MAML3Q96JK9 1138 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 MAF1Q9H063 256 aa23.38■■□□□ 1.33
SYNC-201ENST00000373484 hCG_1642624A0A1W2PR95 340 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 IGHA2P01877 340 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 OLFML2BQ68BL8 750 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 FAM133AQ8N9E0 248 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 KIAA1524Q8TCG1 905 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 ZNF333Q96JL9 665 aa23.37■■□□□ 1.33
SYNC-201ENST00000373484 OPLAHO14841 1288 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 PFKFB2O60825 505 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 POTEB2H3BUK9 544 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 FIBPO43427 364 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 INHAP05111 366 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 IFNAR1P17181 557 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 KRT85P78386 507 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 BAATQ14032 418 aaPredicted RBP23.36■■□□□ 1.33
SYNC-201ENST00000373484 RNF207Q6ZRF8 634 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 FGD4Q96M96 766 aa23.36■■□□□ 1.33
SYNC-201ENST00000373484 BIN2Q9UBW5 565 aaPredicted RBP23.36■■□□□ 1.33
SYNC-201ENST00000373484 V9GY48 417 aaPredicted RBP23.36■■□□□ 1.33
SYNC-201ENST00000373484 RPS6P62753 249 aaKnown RBP23.35■■□□□ 1.33
SYNC-201ENST00000373484 CNTN2Q02246 1040 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 SCRN1Q12765 414 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 SLC30A10Q6XR72 485 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 ZNF467Q7Z7K2 595 aaPredicted RBP23.35■■□□□ 1.33
SYNC-201ENST00000373484 MCF2L2Q86YR7 1114 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 FAM200AQ8TCP9 573 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 KIF3AQ9Y496 699 aa23.35■■□□□ 1.33
SYNC-201ENST00000373484 CAVIN2O95810 425 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 UBXN2AP68543 259 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 GHRHRQ02643 423 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 TRIM32Q13049 653 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 ME3Q16798 604 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 FOXD4L6Q3SYB3 417 aaPredicted RBP23.34■■□□□ 1.33
SYNC-201ENST00000373484 FOXD4L3Q6VB84 417 aaPredicted RBP23.34■■□□□ 1.33
SYNC-201ENST00000373484 TBC1D5Q92609 795 aa23.34■■□□□ 1.33
SYNC-201ENST00000373484 LARGE1O95461 756 aa23.33■■□□□ 1.33
SYNC-201ENST00000373484 DNM1Q05193 864 aaKnown RBP23.33■■□□□ 1.33
SYNC-201ENST00000373484 CCDC83Q8IWF9 413 aa23.33■■□□□ 1.33
SYNC-201ENST00000373484 PHKBQ93100 1093 aa23.33■■□□□ 1.33
SYNC-201ENST00000373484 SCAND2PQ9GZW5 306 aaPredicted RBP23.33■■□□□ 1.33
SYNC-201ENST00000373484 SOWAHBA6NEL2 793 aa23.33■■□□□ 1.32
SYNC-201ENST00000373484 PRPF3O43395 683 aaKnown RBP23.33■■□□□ 1.32
SYNC-201ENST00000373484 MAP3K21Q5TCX8 1036 aa23.33■■□□□ 1.32
SYNC-201ENST00000373484 MFSD14CQ5VZR4 134 aa23.33■■□□□ 1.32
SYNC-201ENST00000373484 MSL3Q8N5Y2 521 aaKnown RBP23.33■■□□□ 1.32
SYNC-201ENST00000373484 TINF2Q9BSI4 451 aa23.33■■□□□ 1.32
SYNC-201ENST00000373484 RNF26Q9BY78 433 aaPredicted RBP23.33■■□□□ 1.32
SYNC-201ENST00000373484 TTC12Q9H892 705 aaPredicted RBP23.33■■□□□ 1.32
SYNC-201ENST00000373484 LRRC37A2A6NM11 1700 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 BRCA2P51587 3418 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 ASTN1O14525 1302 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 CPLX1O14810 134 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 CALML3P27482 149 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 MAMDC4Q6UXC1 1216 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 RBM43Q6ZSC3 357 aaKnown RBP23.32■■□□□ 1.32
SYNC-201ENST00000373484 SAMD3Q8N6K7 520 aa23.32■■□□□ 1.32
SYNC-201ENST00000373484 PURBQ96QR8 312 aaKnown RBP23.32■■□□□ 1.32
SYNC-201ENST00000373484 hCG_1984214I3L0E3 225 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 CFBP00751 764 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 PRKAR2AP13861 404 aaKnown RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 CYP2C19P33261 490 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 HSD17B4P51659 736 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 CACNB2Q08289 660 aaPredicted RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 PFKFB3Q16875 520 aaPredicted RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 CPLX2Q6PUV4 134 aaKnown RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 HEATR3Q7Z4Q2 680 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 ZNF713Q8N859 430 aaPredicted RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 GPKOWQ92917 476 aaPredicted RBP eCLIP23.31■■□□□ 1.32
SYNC-201ENST00000373484 GTF3C6Q969F1 213 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 DDX19AQ9NUU7 478 aaKnown RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 MTFR1Q15390 333 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.31■■□□□ 1.32
SYNC-201ENST00000373484 SLC26A6Q9BXS9 759 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 FRMPD3Q5JV73 1810 aa23.31■■□□□ 1.32
SYNC-201ENST00000373484 SYNGAP1Q96PV0 1343 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms