RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ERCC3P19447 782 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 CLCN1P35523 988 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 LACTBP83111 547 aaPredicted RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 STX1AQ16623 288 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 USH1GQ495M9 461 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 LUZP1Q86V48 1076 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 ZNF296Q8WUU4 475 aaPredicted RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 DNAJC25Q9H1X3 360 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 CUTAO60888 179 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 ALAS1P13196 640 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 CTGFP29279 349 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 KRT2P35908 639 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 ZNF165P49910 485 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 CAP1Q01518 475 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
C9orf78-201ENST00000372447 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
C9orf78-201ENST00000372447 SLC25A27O95847 323 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 SHCBP1Q8NEM2 672 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 COA7Q96BR5 231 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 ARHGAP39Q9C0H5 1083 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 HPSEQ9Y251 543 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
C9orf78-201ENST00000372447 FAM237AA0A1B0GTK4 181 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 AP5Z1O43299 807 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 FKTNO75072 461 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 PFKFB3Q16875 520 aaPredicted RBP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 RESP18Q5W5W9 173 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 KRI1Q8N9T8 703 aaKnown RBP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 BRMS1Q9HCU9 246 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 HSPA8P11142 646 aaKnown RBP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 SCG2P13521 617 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
C9orf78-201ENST00000372447 MAPK4P31152 587 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 SYKP43405 635 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 TIGD1Q96MW7 591 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 CLIC6Q96NY7 704 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 MROH8Q9H579 483 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 PNMA2Q9UL42 364 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 CEP131Q9UPN4 1083 aa18.22■□□□□ 0.51
C9orf78-201ENST00000372447 PSMC4P43686 418 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 TKFCQ3LXA3 575 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 HEATR3Q7Z4Q2 680 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 GPR142Q7Z601 462 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 CHST13Q8NET6 341 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 CLEC4DQ8WXI8 215 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 KIAA1468Q9P260 1216 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 PCDHB6Q9Y5E3 794 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 MYH6P13533 1939 aa18.21■□□□□ 0.51
C9orf78-201ENST00000372447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
C9orf78-201ENST00000372447 COPB2P35606 906 aa18.2■□□□□ 0.5
C9orf78-201ENST00000372447 C11orf57Q6ZUT1 292 aaPredicted RBP18.2■□□□□ 0.5
C9orf78-201ENST00000372447 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
C9orf78-201ENST00000372447 ACAD9Q9H845 621 aa18.2■□□□□ 0.5
C9orf78-201ENST00000372447 ABCB11O95342 1321 aa18.2■□□□□ 0.5
C9orf78-201ENST00000372447 NFIBO00712 420 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 PTPREP23469 700 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 TRAF1Q13077 416 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 KIF22Q14807 665 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 NPY5RQ15761 445 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 PLEKHH3Q7Z736 793 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 ERCC4Q92889 916 aaPredicted RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 FBXO2Q9UK22 296 aaPredicted RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 ZKSCAN5Q9Y2L8 839 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 OPLAHO14841 1288 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 CTCFP49711 727 aaPredicted RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 LBX1P52954 281 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 FCGRTP55899 365 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 IQCB1Q15051 598 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 TBC1D5Q92609 795 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 TNFRSF25Q93038 417 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
C9orf78-201ENST00000372447 MORC2Q9Y6X9 1032 aaPredicted RBP18.19■□□□□ 0.5
C9orf78-201ENST00000372447 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
C9orf78-201ENST00000372447 STXBP3O00186 592 aa18.18■□□□□ 0.5
C9orf78-201ENST00000372447 TNPO2O14787 897 aaKnown RBP18.18■□□□□ 0.5
C9orf78-201ENST00000372447 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
C9orf78-201ENST00000372447 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
C9orf78-201ENST00000372447 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
C9orf78-201ENST00000372447 FAM205CA6NFA0 338 aa18.17■□□□□ 0.5
C9orf78-201ENST00000372447 STRNO43815 780 aa18.17■□□□□ 0.5
C9orf78-201ENST00000372447 FCER1AP12319 257 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms