RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SPATA31A1Q5TZJ5 1347 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 CD19P15391 556 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 RFX1P22670 979 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 LONRF3Q496Y0 759 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 PODNQ7Z5L7 613 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 APLFQ8IW19 511 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 DMP1Q13316 513 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 VSIG1Q86XK7 387 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ARHGAP24Q8N264 748 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 MICAL1Q8TDZ2 1067 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 OSBPL3Q9H4L5 887 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 SPON1Q9HCB6 807 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 SAR1BQ9Y6B6 198 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 PPRC1Q5VV67 1664 aaKnown RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 hCG_1984214I3L0E3 225 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 RSPH3Q86UC2 560 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF713Q8N859 430 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF277Q9NRM2 450 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 PCDHA4Q9UN74 947 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ADALQ6DHV7 355 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF589Q86UQ0 364 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 PNMA8AQ86V59 439 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 FAM160B2Q86V87 743 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ABTB1Q969K4 478 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 XAB2Q9HCS7 855 aaKnown RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ARL1P40616 181 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 TFDP1Q14186 410 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 GKAP1Q5VSY0 366 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 KLHL7Q8IXQ5 586 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 GOLGA5Q8TBA6 731 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF577Q9BSK1 485 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 PANK4Q9NVE7 773 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 RTEL1Q9NZ71 1219 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZKSCAN8Q15776 578 aaPredicted RBP14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 ERCC6LQ2NKX8 1250 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 LRRC8AQ8IWT6 810 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 RDH13Q8NBN7 331 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 TSC1Q92574 1164 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 MPP4Q96JB8 637 aa14.57□□□□□ -0.08
RAPGEF1-201ENST00000372189 FMNL1O95466 1100 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 ATF7P17544 494 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 CDK8P49336 464 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 CYP2J2P51589 502 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 UBXN2AP68543 259 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 UAP1Q16222 522 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 MIS18BP1Q6P0N0 1132 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 MCUR1Q96AQ8 359 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 TNNC2P02585 160 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 PLCB4Q15147 1175 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 OSBP2Q969R2 916 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 CREB3O43889 395 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 MYOCDQ8IZQ8 938 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 GPT2Q8TD30 523 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 KIAA1468Q9P260 1216 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF131P52739 623 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 ATP6V0A1Q93050 837 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 RNF26Q9BY78 433 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF341Q9BYN7 854 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 FRMD3A2A2Y4 597 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 BTBD18B2RXH4 712 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 PPP1R12AO14974 1030 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 TPD52L2O43399 206 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 RANBP1P43487 201 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 SCRN1Q12765 414 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 PNOCQ13519 176 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 ARHGEF2Q92974 986 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 PIGSQ96S52 555 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 CD209Q9NNX6 404 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 SEPT9Q9UHD8 586 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 RPAP1Q9BWH6 1393 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 SASH1O94885 1247 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 IGKV5-2P06315 115 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 NFIXQ14938 502 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 CELF1Q92879 486 aaKnown RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 TRIM31Q9BZY9 425 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 AGLP35573 1532 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 GNGT1P63211 74 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 CCDC84Q86UT8 332 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 PPP2R2CQ9Y2T4 447 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 GPSM2P81274 684 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 DMTNQ08495 405 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 APOA5Q6Q788 366 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 TMEM179Q6ZVK1 233 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 COL4A3BPQ9Y5P4 624 aa14.55□□□□□ -0.08
RAPGEF1-201ENST00000372189 ZNF521Q96K83 1311 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 LRRIQ4A6NIV6 560 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CYP21A2P08686 494 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 CDC25BP30305 580 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 LONP1P36776 959 aaKnown RBP14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 MCAMP43121 646 aa14.54□□□□□ -0.08
RAPGEF1-201ENST00000372189 ADKP55263 362 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms