RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MTMR2Q13614 643 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 DHX58Q96C10 678 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 WDR18Q9BV38 432 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
TSPAN1-201ENST00000372003 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 CXCL11O14625 94 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 BMP6P22004 513 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 GTF2A2P52657 109 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 RCAN1P53805 252 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 HMGCS2P54868 508 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 NTRK3Q16288 839 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 ISM2Q6H9L7 571 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 PDILTQ8N807 584 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 UBAC1Q9BSL1 405 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 FOXP1Q9H334 677 aaPredicted RBP12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
TSPAN1-201ENST00000372003 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 ZBTB43O43298 467 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 TTLL1O95922 423 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 BACE1P56817 501 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 CCL15Q16663 113 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 NOSTRINQ8IVI9 506 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
TSPAN1-201ENST00000372003 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 CETPP11597 493 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 MCM3P25205 808 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PBX1P40424 430 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PPFIBP1Q86W92 1011 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 CNGA4Q8IV77 575 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 LRRC47Q8N1G4 583 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 BRI3BPQ8WY22 251 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 MED4Q9NPJ6 270 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TCP11L1Q9NUJ3 509 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 SRPRBQ9Y5M8 271 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 LAMB1P07942 1786 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 IFIT3O14879 490 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PPFIA3O75145 1194 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 IFNAR1P17181 557 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 CDC27P30260 824 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 ADKP55263 362 aaKnown RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TRIM14Q14142 442 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 SRLQ86TD4 932 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 FAM177A1Q8N128 213 aaPredicted RBP12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PTPN18Q99952 460 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 SH2D4AQ9H788 454 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 TNKSO95271 1327 aa12.84□□□□□ -0.35
TSPAN1-201ENST00000372003 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.35
TSPAN1-201ENST00000372003 OTOFQ9HC10 1997 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 ERICH2A1L162 156 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 MYO1CO00159 1063 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 MMP1P03956 469 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 MAP2K2P36507 400 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 NT5C2P49902 561 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 USP14P54578 494 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms