RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RAD21O60216 631 aa32.32■■■□□ 2.76
SSBP3-204ENST00000371320 MRIQ9BWK5 157 aa32.32■■■□□ 2.76
SSBP3-204ENST00000371320 RBM5P52756 815 aaKnown RBP eCLIP32.31■■■□□ 2.76
SSBP3-204ENST00000371320 TBC1D8BQ0IIM8 1120 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 DYMQ7RTS9 669 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 PCDHAC2Q9Y5I4 1007 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 EPN1Q9Y6I3 576 aaPredicted RBP32.31■■■□□ 2.76
SSBP3-204ENST00000371320 COL11A2P13942 1736 aaPredicted RBP32.31■■■□□ 2.76
SSBP3-204ENST00000371320 MARCH6O60337 910 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 APBA3O96018 575 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 STRIP1Q5VSL9 837 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 NUDT12Q9BQG2 462 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 SEMA6BQ9H3T3 888 aa32.31■■■□□ 2.76
SSBP3-204ENST00000371320 GCFC2P16383 781 aaKnown RBP32.3■■■□□ 2.76
SSBP3-204ENST00000371320 CERKLQ49MI3 558 aaPredicted RBP32.3■■■□□ 2.76
SSBP3-204ENST00000371320 CENPPQ6IPU0 288 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 NUP58Q9BVL2 599 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 LRRC27Q9C0I9 530 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 PI4KBQ9UBF8 816 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 GREB1LQ9C091 1923 aaPredicted RBP32.3■■■□□ 2.76
SSBP3-204ENST00000371320 FAM196BA6NMK8 535 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 NDUFA10O95299 355 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 EEF2P13639 858 aaKnown RBP32.3■■■□□ 2.76
SSBP3-204ENST00000371320 TMEM119Q4V9L6 283 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 MSL1Q68DK7 614 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 HAS1Q92839 578 aa32.3■■■□□ 2.76
SSBP3-204ENST00000371320 NOC4LQ9BVI4 516 aaKnown RBP32.3■■■□□ 2.76
SSBP3-204ENST00000371320 CTAGE9A4FU28 777 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 DDTLA6NHG4 134 aaPredicted RBP32.29■■■□□ 2.76
SSBP3-204ENST00000371320 ARHGAP25P42331 645 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 SLC1A4P43007 532 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 TEX35Q5T0J7 233 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 RSRC2Q7L4I2 434 aaKnown RBP32.29■■■□□ 2.76
SSBP3-204ENST00000371320 C2CD5Q86YS7 1000 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 ZSCAN29Q8IWY8 852 aaPredicted RBP32.29■■■□□ 2.76
SSBP3-204ENST00000371320 KRT222Q8N1A0 295 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 MKL1Q969V6 931 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 KANSL2Q9H9L4 492 aa32.29■■■□□ 2.76
SSBP3-204ENST00000371320 TRIM21P19474 475 aaKnown RBP32.28■■■□□ 2.76
SSBP3-204ENST00000371320 FKBP1AP62942 108 aaKnown RBP32.28■■■□□ 2.76
SSBP3-204ENST00000371320 KIF4BQ2VIQ3 1234 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 SLC35F6Q8N357 371 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 GPR161Q8N6U8 529 aaKnown RBP32.28■■■□□ 2.76
SSBP3-204ENST00000371320 RETREG2Q8NC44 543 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 DCAF4Q8WV16 495 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 TRIM34Q9BYJ4 488 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 GLT8D2Q9H1C3 349 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 FAM53CQ9NYF3 392 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 NYAP2Q9P242 653 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 MYO1AQ9UBC5 1043 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 FAM198AQ9UFP1 575 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 ABL1P00519 1130 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 QRICH1Q2TAL8 776 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 DACT2Q5SW24 774 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 GOLGA1Q92805 767 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 NAP1L4Q99733 375 aaKnown RBP32.28■■■□□ 2.76
SSBP3-204ENST00000371320 IDI2Q9BXS1 227 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 ATF5Q9Y2D1 282 aaPredicted RBP32.28■■■□□ 2.76
SSBP3-204ENST00000371320 MYH4Q9Y623 1939 aa32.28■■■□□ 2.76
SSBP3-204ENST00000371320 HDLBPQ00341 1268 aaKnown RBP32.27■■■□□ 2.76
SSBP3-204ENST00000371320 TUBB2AQ13885 445 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 BMS1Q14692 1282 aaKnown RBP32.27■■■□□ 2.76
SSBP3-204ENST00000371320 SLFN13Q68D06 897 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 TUBB2BQ9BVA1 445 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 CDC23Q9UJX2 597 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 ECE2O60344 883 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 IDEP14735 1019 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 SHROOM1Q2M3G4 852 aaPredicted RBP32.27■■■□□ 2.76
SSBP3-204ENST00000371320 MIIPQ5JXC2 388 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 ZNF772Q68DY9 489 aaPredicted RBP32.27■■■□□ 2.76
SSBP3-204ENST00000371320 WDR59Q6PJI9 974 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 KCNK18Q7Z418 384 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 DDX12PQ92771 950 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 PCMTD1Q96MG8 357 aaPredicted RBP32.27■■■□□ 2.76
SSBP3-204ENST00000371320 TTYH3Q9C0H2 523 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 PCDHA12Q9UN75 941 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 PCDHA1Q9Y5I3 950 aa32.27■■■□□ 2.76
SSBP3-204ENST00000371320 ZSCAN20P17040 1043 aaPredicted RBP32.26■■■□□ 2.75
SSBP3-204ENST00000371320 TMCO3Q6UWJ1 677 aa32.26■■■□□ 2.75
SSBP3-204ENST00000371320 GUF1Q8N442 669 aaKnown RBP32.26■■■□□ 2.75
SSBP3-204ENST00000371320 FKBP15Q5T1M5 1219 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 RABGGTAQ92696 567 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 GJA10Q969M2 543 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 EPC1Q9H2F5 836 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 AGPAT5Q9NUQ2 364 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 REXO2Q9Y3B8 237 aaKnown RBP32.25■■■□□ 2.75
SSBP3-204ENST00000371320 RASSF10A6NK89 507 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L15C9J2P7 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L13C9JLJ4 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L11C9JVI0 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L18D6R9N7 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L22D6RA61 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L17D6RBQ6 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L19D6RCP7 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L20D6RJB6 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 KLK7P49862 253 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L24Q0WX57 530 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 USP17L6PQ6QN14 398 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 SH3BP5LQ7L8J4 393 aa32.25■■■□□ 2.75
SSBP3-204ENST00000371320 ZNHIT6Q9NWK9 470 aaKnown RBP32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms