RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 BUB1O43683 1085 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 MBD4O95243 580 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 RPSAP08865 295 aaKnown RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 HPDP32754 393 aaPredicted RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 NF2P35240 595 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 ORAI2Q96SN7 254 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 FLT1P17948 1338 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 GMNCA6NCL1 334 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 A6NNZ2 444 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 RHOBTB3O94955 611 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 STK4Q13043 487 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 TUBB8Q3ZCM7 444 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 UBAP2Q5T6F2 1119 aaKnown RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 PLCB1Q9NQ66 1216 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 PHF20L1A8MW92 1017 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 FCER1AP12319 257 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 DRD4P21917 467 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 TROAPQ12815 778 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 LRCH2Q5VUJ6 765 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 GREM2Q9H772 168 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 CFAP58Q5T655 872 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 SEMA6BQ9H3T3 888 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 SLC39A2Q9NP94 309 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 SLC12A4Q9UP95 1085 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 CNTNAP5Q8WYK1 1306 aa12.93□□□□□ -0.34
SMARCA1-201ENST00000371121 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 HMGB1P1B2RPK0 211 aaPredicted RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 M0R2N6 131 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 DNAJC8O75937 253 aaPredicted RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 TCP1P17987 556 aaKnown RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 RRP12Q5JTH9 1297 aaKnown RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 CNOT6LQ96LI5 555 aaKnown RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 AGAP1Q9UPQ3 857 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 ANKRD33BA6NCL7 494 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 PRPF3O43395 683 aaKnown RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 MCM7P33993 719 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 KIAA0895Q8NCT3 520 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 SCLT1Q96NL6 688 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 ZNF317Q96PQ6 595 aaPredicted RBP12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 KRT12Q99456 494 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 EPB41L4BQ9H329 900 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 TNKSO95271 1327 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 MAP3K13O43283 966 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 CLSTN1O94985 981 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 KCNB1Q14721 858 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 NOD2Q9HC29 1040 aa12.92□□□□□ -0.34
SMARCA1-201ENST00000371121 RBAK-RBAKDNI3L0D1 243 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 RASSF7Q02833 373 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 NDST4Q9H3R1 872 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 IRF6O14896 467 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 FGFR2P21802 821 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 PIK3AP1Q6ZUJ8 805 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 PLIN2Q99541 437 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 ACTR5Q9H9F9 607 aaPredicted RBP12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 NOL4O94818 638 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 RCAN1P53805 252 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 RASGRF1Q13972 1273 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 BZW1Q7L1Q6 419 aaKnown RBP12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 MDM1Q8TC05 714 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
SMARCA1-201ENST00000371121 FTCDO95954 541 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 MICALCLQ6ZW33 695 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 TBC1D31Q96DN5 1066 aa12.9□□□□□ -0.34
SMARCA1-201ENST00000371121 PACSIN1Q9BY11 444 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms