RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 TMEM39AQ9NV64 488 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 LAMA4Q16363 1823 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
LMO4-201ENST00000370542 HIP1O00291 1037 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 TIMP1P01033 207 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 CD4P01730 458 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 RAG1P15918 1043 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 SMPD1P17405 629 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 FAM126BQ8IXS8 530 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 ESR2Q92731 530 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 SEZ6LQ9BYH1 1024 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 MAF1Q9H063 256 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
LMO4-201ENST00000370542 NEDD4P46934 1319 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 XIRP2A4UGR9 3374 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 RBM47A0AV96 593 aaKnown RBP17.27■□□□□ 0.36
LMO4-201ENST00000370542 NFIBO00712 420 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 ZNF213O14771 459 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 ST18O60284 1047 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 CABYRO75952 493 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 BAATQ14032 418 aaPredicted RBP17.27■□□□□ 0.36
LMO4-201ENST00000370542 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 PDGFCQ9NRA1 345 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
LMO4-201ENST00000370542 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 MCM2P49736 904 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 FPGSQ05932 587 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 GPATCH4Q5T3I0 446 aaKnown RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 MFSD5Q6N075 450 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 TLK2Q86UE8 772 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 SYAP1Q96A49 352 aaPredicted RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 ADD3Q9UEY8 706 aaKnown RBP17.26■□□□□ 0.35
LMO4-201ENST00000370542 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
LMO4-201ENST00000370542 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 EDNRBP24530 442 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 ALDH5A1P51649 535 aaPredicted RBP17.25■□□□□ 0.35
LMO4-201ENST00000370542 BEX3Q00994 111 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 FSCN1Q16658 493 aaKnown RBP17.25■□□□□ 0.35
LMO4-201ENST00000370542 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 DUSP28Q4G0W2 176 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 TMEM63BQ5T3F8 832 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
LMO4-201ENST00000370542 ZNF576Q9H609 170 aa17.25■□□□□ 0.35
LMO4-201ENST00000370542 DNAJB2P25686 324 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 C16orf59Q7L2K0 433 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 ALYREFQ86V81 257 aaKnown RBP17.24■□□□□ 0.35
LMO4-201ENST00000370542 DNERQ8NFT8 737 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
LMO4-201ENST00000370542 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
LMO4-201ENST00000370542 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
LMO4-201ENST00000370542 RPS6P62753 249 aaKnown RBP17.23■□□□□ 0.35
LMO4-201ENST00000370542 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
LMO4-201ENST00000370542 AP5M1Q9H0R1 490 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 IL25Q9H293 177 aa17.23■□□□□ 0.35
LMO4-201ENST00000370542 ZEB2O60315 1214 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 KDM4AO75164 1064 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 BMP1P13497 986 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 PTGS1P23219 599 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
LMO4-201ENST00000370542 SLC30A10Q6XR72 485 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 ENAHQ8N8S7 591 aaPredicted RBP17.22■□□□□ 0.35
LMO4-201ENST00000370542 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
LMO4-201ENST00000370542 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
LMO4-201ENST00000370542 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
LMO4-201ENST00000370542 B4E1Z4 1266 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
LMO4-201ENST00000370542 REC8O95072 547 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.35
LMO4-201ENST00000370542 ITGA7Q13683 1181 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 IMMTQ16891 758 aaKnown RBP17.21■□□□□ 0.35
LMO4-201ENST00000370542 UVSSAQ2YD98 709 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 TMEM240Q5SV17 173 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
LMO4-201ENST00000370542 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
LMO4-201ENST00000370542 WDR11Q9BZH6 1224 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms