RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 TFDP1Q14186 410 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 CCDC138Q96M89 665 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 RPS6KC1Q96S38 1066 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 COPG1Q9Y678 874 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 GNA14O95837 355 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 NFKBIAP25963 317 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 KCNJ6P48051 423 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 NANOGNBQ7Z5D8 188 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 MLKLQ8NB16 471 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 CFAP61Q8NHU2 1237 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 RFWD2Q8NHY2 731 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 LLPHQ9BRT6 129 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 ATP1A2P50993 1020 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 ANKRD35Q8N283 1001 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 INTS9Q9NV88 658 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 DEAF1O75398 565 aaPredicted RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 TNNC2P02585 160 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 ARPC4P59998 168 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 MFSD14BQ5SR56 506 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 BHMT2Q9H2M3 363 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 TMEM63CQ9P1W3 806 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 SESN1Q9Y6P5 492 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 PTPREP23469 700 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 KRT9P35527 623 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 INPP1P49441 399 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ROR2Q01974 943 aaKnown RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 CALCRLQ16602 461 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 CC2D1AQ6P1N0 951 aaPredicted RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 BAG2O95816 211 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 STX17P56962 302 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 RPS8P62241 208 aaKnown RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 METTL13Q8N6R0 699 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 RNF217Q8TC41 542 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 FAM8A1Q9UBU6 413 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 LIN7AO14910 233 aaPredicted RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 ARHGEF18Q6ZSZ5 1173 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 LRRC8CQ8TDW0 803 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 TRIM11Q96F44 468 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 HAUS4Q9H6D7 363 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ATP8A2Q9NTI2 1148 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 GAS7O60861 476 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 MCF2P10911 925 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 PDE6CP51160 858 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 SLC12A2P55011 1212 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ADRM1Q16186 407 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 DAB2IPQ5VWQ8 1189 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 SPATA21Q7Z572 469 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 SLFN12Q8IYM2 578 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 CCDC124Q96CT7 223 aaKnown RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 SH3GL1Q99961 368 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 NDEL1Q9GZM8 345 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 AOX1Q06278 1338 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 MAST1Q9Y2H9 1570 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 SBNO2Q9Y2G9 1366 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 KRT19P08727 400 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 TDRD7Q8NHU6 1098 aaKnown RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 SSH2Q76I76 1423 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ADCY3O60266 1144 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 EYA1Q99502 592 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 USP40Q9NVE5 1235 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 PACSIN2Q9UNF0 486 aaPredicted RBP10.93□□□□□ -0.66
SIM1-202ENST00000369208 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.93□□□□□ -0.66
SIM1-202ENST00000369208 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 ZFYVE16Q7Z3T8 1539 aa10.93□□□□□ -0.66
SIM1-202ENST00000369208 N4BP1O75113 896 aaKnown RBP10.92□□□□□ -0.66
SIM1-202ENST00000369208 SCP2P22307 547 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 SERPINB6P35237 376 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 NLRP12P59046 1061 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 BBS5Q8N3I7 341 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
SIM1-202ENST00000369208 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 CFBP00751 764 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 VIL1P09327 827 aaKnown RBP10.92□□□□□ -0.66
SIM1-202ENST00000369208 KCNA2P16389 499 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 ATICP31939 592 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 FLOT2Q14254 428 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 KRT72Q14CN4 511 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 Q4G0T1 1027 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 CREB3L3Q68CJ9 461 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 PDXDC1Q6P996 788 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 GCNAQ96QF7 691 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 PARD6BQ9BYG5 372 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 C6orf203Q9P0P8 240 aaPredicted RBP10.92□□□□□ -0.66
SIM1-202ENST00000369208 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
SIM1-202ENST00000369208 SLC8A2Q9UPR5 921 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 ATP8B3O60423 1300 aa10.92□□□□□ -0.66
SIM1-202ENST00000369208 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms