RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ITGB3BPQ13352 177 aaPredicted RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 SNCBQ16143 134 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 IL17AQ16552 155 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 CFAP221Q4G0U5 840 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 RNF187Q5TA31 235 aaPredicted RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 IQCA1Q86XH1 822 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 DUSP9Q99956 384 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 DISC1Q9NRI5 854 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 ANAPC4Q9UJX5 808 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 ODF2LQ9ULJ1 636 aa11.66□□□□□ -0.54
LYSMD1-201ENST00000368908 MOCS3O95396 460 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CCNE1P24864 410 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 PHKA1P46020 1223 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 KIF11P52732 1056 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 IFFO1Q0D2I5 559 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CCDC121Q6ZUS5 278 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 RNF10Q8N5U6 811 aaKnown RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 RBM12Q9NTZ6 932 aaKnown RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 TNKSO95271 1327 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 A1BGP04217 495 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 ERCC3P19447 782 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 BAG6P46379 1132 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 SATB1Q01826 763 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CRYMQ14894 314 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 LACTB2Q53H82 288 aaPredicted RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 COBLL1Q53SF7 1204 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 FKBP15Q5T1M5 1219 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 KCTD16Q68DU8 428 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CSGALNACT2Q8N6G5 542 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 MAGEB6Q8N7X4 407 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 SMCR8Q8TEV9 937 aaPredicted RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 ESR2Q92731 530 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CYFIP2Q96F07 1278 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 TMBIM4Q9HC24 238 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 PLCB1Q9NQ66 1216 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
LYSMD1-201ENST00000368908 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 C5orf60A6NFR6 353 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 PLSCR1O15162 318 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 DDAH1O94760 285 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 PDE8BO95263 885 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 IFT88Q13099 833 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 N4BP2L2Q92802 583 aaPredicted RBP11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 P2RX5Q93086 422 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 TLR10Q9BXR5 811 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CUEDC2Q9H467 287 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ARHGAP20Q9P2F6 1191 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ABCB11O95342 1321 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CNTNAP5Q8WYK1 1306 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ANKRD18BA2A2Z9 1011 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 PRDM1O75626 825 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 HEXIM1O94992 359 aaKnown RBP11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 SLC8A1P32418 973 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 TMTC3Q6ZXV5 915 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CATIPQ7Z7H3 387 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CCDC114Q96M63 670 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 ATP6V0A4Q9HBG4 840 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 KBTBD4Q9NVX7 518 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 TMOD3Q9NYL9 352 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 NFU1Q9UMS0 254 aa11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
LYSMD1-201ENST00000368908 E7EVH7 732 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 GLI1P08151 1106 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 PAEPP09466 180 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 EZRP15311 586 aaKnown RBP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 FGFR2P21802 821 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 ITGA6P23229 1130 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 MATR3P43243 847 aaKnown RBP eCLIP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 MTIF2P46199 727 aaKnown RBP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 KLK7P49862 253 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 NAALADL2Q58DX5 795 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 CYB5D1Q6P9G0 228 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 TBC1D22AQ8WUA7 517 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 LPIN2Q92539 896 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 NOC4LQ9BVI4 516 aaKnown RBP11.63□□□□□ -0.55
LYSMD1-201ENST00000368908 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms