RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 PZPP20742 1482 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 DACT3Q96B18 629 aaPredicted RBP19.56■□□□□ 0.72
SNX27-203ENST00000368843 PCIF1Q9H4Z3 704 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 SLC38A10Q9HBR0 1119 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 SPDYE2BA6NHP3 402 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 CCDC51Q96ER9 411 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 USP28Q96RU2 1077 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 UBN1Q9NPG3 1134 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 OSTNP61366 133 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 GPATCH4Q5T3I0 446 aaKnown RBP19.56■□□□□ 0.72
SNX27-203ENST00000368843 TM6SF1Q9BZW5 370 aa19.56■□□□□ 0.72
SNX27-203ENST00000368843 CASP2P42575 452 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 SESN3P58005 492 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
SNX27-203ENST00000368843 CCDC93Q567U6 631 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 TMTC4Q5T4D3 741 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 MYO5CQ9NQX4 1742 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 ARHGAP42A6NI28 874 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 AOC3Q16853 763 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 MEIS1O00470 390 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 CEP170P1Q96L14 293 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 PCP11498 1178 aaKnown RBP19.55■□□□□ 0.72
SNX27-203ENST00000368843 INPP5BP32019 993 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 JADE1Q6IE81 842 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 ZNF215Q9UL58 517 aaPredicted RBP19.55■□□□□ 0.72
SNX27-203ENST00000368843 HYOU1Q9Y4L1 999 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 ANGPTL3Q9Y5C1 460 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 SYDE2Q5VT97 1194 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 CC2D2BQ6DHV5 1058 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 BBS5Q8N3I7 341 aa19.55■□□□□ 0.72
SNX27-203ENST00000368843 MYL3P08590 195 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 SNAP25P60880 206 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 SSH3Q8TE77 659 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 FAM149B1Q96BN6 582 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 CABS1Q96KC9 395 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 NT5C1BQ96P26 610 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 MTERF2Q49AM1 385 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 C7orf31Q8N865 590 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 CPSF3Q9UKF6 684 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 OAS2P29728 719 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 TFAMQ00059 246 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 SCRN1Q12765 414 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 NAA35Q5VZE5 725 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 JPH2Q9BR39 696 aaPredicted RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 ABCF3Q9NUQ8 709 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 TYW1Q9NV66 732 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 NDUFA8P51970 172 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 MESDQ14696 234 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 TTC30AQ86WT1 665 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 ACCSQ96QU6 501 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 SLC12A6Q9UHW9 1150 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 BMP3P12645 472 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 SLC17A8Q8NDX2 589 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 SLC10A4Q96EP9 437 aa19.54■□□□□ 0.72
SNX27-203ENST00000368843 CNOT6LQ96LI5 555 aaKnown RBP19.54■□□□□ 0.72
SNX27-203ENST00000368843 SAMD9Q5K651 1589 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 SRGAP2BP0DMP2 458 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 RASSF4Q9H2L5 321 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 KIF3CO14782 793 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 ADCY1Q08828 1119 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 MICAL1Q8TDZ2 1067 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 RNF40O75150 1001 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 UBE3CQ15386 1083 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 FRMD3A2A2Y4 597 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 VGLL3A8MV65 326 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 GSPT1P15170 499 aaKnown RBP19.53■□□□□ 0.72
SNX27-203ENST00000368843 GCNAQ96QF7 691 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 STK25O00506 426 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 CIAO1O76071 339 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 HEXIM1O94992 359 aaKnown RBP19.53■□□□□ 0.72
SNX27-203ENST00000368843 PDIA3P30101 505 aaKnown RBP19.53■□□□□ 0.72
SNX27-203ENST00000368843 ATP1A2P50993 1020 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 PHLDB2Q86SQ0 1253 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 NACC1Q96RE7 527 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
SNX27-203ENST00000368843 FNDC3AQ9Y2H6 1198 aaKnown RBP19.53■□□□□ 0.72
SNX27-203ENST00000368843 USP17L3A6NCW0 530 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 USP17L4A6NCW7 530 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 CLIC2O15247 247 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 BAG2O95816 211 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 TSNAXIP1Q2TAA8 658 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 USP17L1Q7RTZ2 530 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 COA7Q96BR5 231 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.72
SNX27-203ENST00000368843 NCAPGQ9BPX3 1015 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
SNX27-203ENST00000368843 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.52■□□□□ 0.72
SNX27-203ENST00000368843 RIPOR2Q9Y4F9 1068 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.52■□□□□ 0.72
SNX27-203ENST00000368843 ANXA13P27216 316 aa19.52■□□□□ 0.72
SNX27-203ENST00000368843 PSMC2P35998 433 aaKnown RBP19.52■□□□□ 0.72
SNX27-203ENST00000368843 YWHAGP61981 247 aaKnown RBP eCLIP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms