RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 DYNLL1P63167 89 aaKnown RBP12.57□□□□□ -0.4
TUBE1-201ENST00000368657 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
TUBE1-201ENST00000368657 GABPAQ06546 454 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 PPP2R3CQ969Q6 453 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-201ENST00000368657 MYL3P08590 195 aa12.56□□□□□ -0.4
TUBE1-201ENST00000368657 BRDTQ58F21 947 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-201ENST00000368657 TAPT1Q6NXT6 567 aa12.56□□□□□ -0.4
TUBE1-201ENST00000368657 LRRC8DQ7L1W4 858 aa12.56□□□□□ -0.4
TUBE1-201ENST00000368657 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
TUBE1-201ENST00000368657 FAM208BQ5VWN6 2430 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 C5orf67F2Z3F1 127 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 NBNO60934 754 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 ZBED4O75132 1171 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 ICA1Q05084 483 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 PTGISQ16647 500 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 DUSP28Q4G0W2 176 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 PRPF38AQ8NAV1 312 aaKnown RBP12.55□□□□□ -0.4
TUBE1-201ENST00000368657 RUBCNQ92622 972 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-201ENST00000368657 YME1L1Q96TA2 773 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-201ENST00000368657 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 PDGFCQ9NRA1 345 aa12.55□□□□□ -0.4
TUBE1-201ENST00000368657 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-201ENST00000368657 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
TUBE1-201ENST00000368657 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 USP24Q9UPU5 2620 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 LINC01565O15544 149 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 RBL2Q08999 1139 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 TFCP2Q12800 502 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
TUBE1-201ENST00000368657 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 HINFPQ9BQA5 517 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
TUBE1-201ENST00000368657 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
TUBE1-201ENST00000368657 FASNP49327 2511 aaKnown RBP12.53□□□□□ -0.4
TUBE1-201ENST00000368657 CYP7A1P22680 504 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 PTGS1P23219 599 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
TUBE1-201ENST00000368657 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
TUBE1-201ENST00000368657 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 TCTN1Q2MV58 587 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 CPXCR1Q8N123 301 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 EFHBQ8N7U6 833 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 FRYLO94915 3013 aa12.53□□□□□ -0.4
TUBE1-201ENST00000368657 CEP250Q9BV73 2442 aa12.52□□□□□ -0.4
TUBE1-201ENST00000368657 GRM6O15303 877 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 ADRB1P08588 477 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 CKBP12277 381 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 BMPR1AP36894 532 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 MTMR3Q13615 1198 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 FAM83BQ5T0W9 1011 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 KREMEN2Q8NCW0 462 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 CYP2W1Q8TAV3 490 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 MFSD1Q9H3U5 465 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 SORCS3Q9UPU3 1222 aa12.52□□□□□ -0.41
TUBE1-201ENST00000368657 SCN10AQ9Y5Y9 1956 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 LGR5O75473 907 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-201ENST00000368657 CTNNB1P35222 781 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 OAZ1P54368 228 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 TMEM63BQ5T3F8 832 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
TUBE1-201ENST00000368657 FIBCD1Q8N539 461 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 GPR161Q8N6U8 529 aaKnown RBP12.51□□□□□ -0.41
TUBE1-201ENST00000368657 KANSL2Q9H9L4 492 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 RAD50Q92878 1312 aa12.51□□□□□ -0.41
TUBE1-201ENST00000368657 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
TUBE1-201ENST00000368657 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
TUBE1-201ENST00000368657 DMWDQ09019 674 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 CCDC105Q8IYK2 499 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 SUSD6Q92537 303 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 WDR11Q9BZH6 1224 aa12.5□□□□□ -0.41
TUBE1-201ENST00000368657 RAVER2Q9HCJ3 691 aaKnown RBP12.5□□□□□ -0.41
TUBE1-201ENST00000368657 MICAL3Q7RTP6 2002 aa12.49□□□□□ -0.41
TUBE1-201ENST00000368657 PTPRCP08575 1304 aa12.49□□□□□ -0.41
TUBE1-201ENST00000368657 EMSYQ7Z589 1322 aa12.49□□□□□ -0.41
TUBE1-201ENST00000368657 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms