RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 SCG2P13521 617 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 RGS19P49795 217 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 NAPAP54920 295 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 UBE2SQ16763 222 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 CCDC144BQ3MJ40 725 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 TMEM63BQ5T3F8 832 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 BARHL2Q9NY43 387 aa17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 MAP3K20Q9NYL2 800 aaKnown RBP17.37■□□□□ 0.37
SMPDL3A-201ENST00000368440 TNRC18O15417 2968 aaPredicted RBP17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 LOC102724159A0A0B4J2E5 919 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 CPLX1O14810 134 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 AKR1A1P14550 325 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 PTGS1P23219 599 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 PDE4DQ08499 809 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 PWP2Q15269 919 aaKnown RBP17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 ARHGEF16Q5VV41 709 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 TAPT1Q6NXT6 567 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 SAMD3Q8N6K7 520 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 IL31RAQ8NI17 732 aa17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 NSUN6Q8TEA1 469 aaKnown RBP17.36■□□□□ 0.37
SMPDL3A-201ENST00000368440 MSCO60682 206 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 DIS3LQ8TF46 1054 aaKnown RBP17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 PIK3CDO00329 1044 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 PPP1R18Q6NYC8 613 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 VTA1Q9NP79 307 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 FAM184BQ9ULE4 1060 aa17.35■□□□□ 0.37
SMPDL3A-201ENST00000368440 hCG_1984214I3L0E3 225 aa17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 SSRP1Q08945 709 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 PGM5Q15124 567 aa17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 RABEP1Q15276 862 aa17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 CUL5Q93034 780 aa17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 ZFP91Q96JP5 570 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
SMPDL3A-201ENST00000368440 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 NR3C2P08235 984 aa17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 RARBP10826 455 aa17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 GJC2Q5T442 439 aaPredicted RBP17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 AIFM3Q96NN9 605 aa17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 IWS1Q96ST2 819 aa17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.37
SMPDL3A-201ENST00000368440 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 SMCO2A6NFE2 343 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 PGK1P00558 417 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 SMPD1P17405 629 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 TRIM22Q8IYM9 498 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 RIC8AQ9NPQ8 531 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 XPNPEP3Q9NQH7 507 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 VPS54Q9P1Q0 977 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
SMPDL3A-201ENST00000368440 ALPK3Q96L96 1907 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 ADCY7P51828 1080 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 ANKLE1Q8NAG6 615 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 PAWRQ96IZ0 340 aaKnown RBP17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 PGBD1Q96JS3 809 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 TMEM260Q9NX78 707 aa17.32■□□□□ 0.36
SMPDL3A-201ENST00000368440 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 MYADML2A6NDP7 307 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 B4DLN1 442 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 ADAMTS4O75173 837 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 DUSP11O75319 330 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 DEXIO95424 95 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 MRPL12P52815 198 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 STXBP2Q15833 593 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 GNEQ9Y223 722 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 RGS20O76081 388 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 ARIH2O95376 493 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 LRRC41Q15345 812 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 IQSEC1Q6DN90 963 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 SEPT14Q6ZU15 432 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 VSIG10LQ86VR7 867 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 NSUN7Q8NE18 718 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 WDR11Q9BZH6 1224 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 ZMYND12Q9H0C1 365 aa17.31■□□□□ 0.36
SMPDL3A-201ENST00000368440 STK36Q9NRP7 1315 aa17.3■□□□□ 0.36
SMPDL3A-201ENST00000368440 ESYT2A0FGR8 921 aa17.3■□□□□ 0.36
SMPDL3A-201ENST00000368440 CDKL5O76039 1030 aa17.3■□□□□ 0.36
SMPDL3A-201ENST00000368440 CLK2P49760 499 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-201ENST00000368440 MRPS9P82933 396 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-201ENST00000368440 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms