RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 FBXL16Q8N461 479 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 SRBD1Q8N5C6 995 aaKnown RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 SYTL5Q8TDW5 730 aaPredicted RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 RRP36Q96EU6 259 aaKnown RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 TAAR1Q96RJ0 339 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 SPZ1Q9BXG8 430 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 ZNFX1Q9P2E3 1918 aaKnown RBP11.41□□□□□ -0.58
CD48-202ENST00000368046 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
CD48-202ENST00000368046 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 PGK1P00558 417 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 CFBP00751 764 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 RXRAP19793 462 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 EDNRBP24530 442 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 FGD1P98174 961 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 GHRHRQ02643 423 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 PPP2R5BQ15173 497 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 EEPD1Q7L9B9 569 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 KLHDC9Q8NEP7 349 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 NSUN6Q8TEA1 469 aaKnown RBP11.41□□□□□ -0.58
CD48-202ENST00000368046 TCEANC2Q96MN5 208 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 VTA1Q9NP79 307 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
CD48-202ENST00000368046 MKI67P46013 3256 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 RBM47A0AV96 593 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 OPLAHO14841 1288 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 ZBTB43O43298 467 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 PLEKHA8P1O95397 391 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 RPS6KB1P23443 525 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 HSD17B4P51659 736 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 GJA9P57773 515 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 NKX3-2P78367 333 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 PDE4DQ08499 809 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 SLC39A5Q6ZMH5 540 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 Q6ZUG5 572 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 CMTR1Q8N1G2 835 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 Q9Y3F1 56 aa11.4□□□□□ -0.58
CD48-202ENST00000368046 DDX49Q9Y6V7 483 aaKnown RBP11.4□□□□□ -0.58
CD48-202ENST00000368046 KLF18A0A0U1RQI7 1052 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 H0YGN5 161 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 GCOM1H8Y6P7 765 aaPredicted RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 ADCY6O43306 1168 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 POLR2MP0CAP2 368 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 CPA1P15085 419 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 SMPD1P17405 629 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 RCAN1P53805 252 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 STXBP2Q15833 593 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 KCNA10Q16322 511 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 ARHGEF16Q5VV41 709 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 NOL8Q76FK4 1167 aaKnown RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 RUFY3Q7L099 469 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 MICU3Q86XE3 530 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 RAB11FIP4Q86YS3 637 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 PCSK9Q8NBP7 692 aaKnown RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 PIBF1Q8WXW3 757 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 AGXT2Q9BYV1 514 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 AP5M1Q9H0R1 490 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 UPF3AQ9H1J1 476 aaKnown RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 COL20A1Q9P218 1284 aa11.39□□□□□ -0.59
CD48-202ENST00000368046 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
CD48-202ENST00000368046 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 CCDC196A0A1B0GTZ2 297 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 NR3C2P08235 984 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 C6orf222P0C671 652 aaPredicted RBP11.38□□□□□ -0.59
CD48-202ENST00000368046 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
CD48-202ENST00000368046 CST5P28325 142 aaPredicted RBP11.38□□□□□ -0.59
CD48-202ENST00000368046 PSEN1P49768 467 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 ACLYP53396 1101 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 APOBRQ0VD83 1088 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 C1orf53Q5VUE5 145 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
CD48-202ENST00000368046 BRF1Q92994 677 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
CD48-202ENST00000368046 BOLA1Q9Y3E2 137 aa11.38□□□□□ -0.59
CD48-202ENST00000368046 CYP46A1Q9Y6A2 500 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms