RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ATP2B2Q01814 1243 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 SV2BQ7L1I2 683 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 COA7Q96BR5 231 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 GMCL1Q96IK5 515 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 TRIM9Q9C026 710 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.11
USF1-202ENST00000368020 LRWD1Q9UFC0 647 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 FAM198AQ9UFP1 575 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
USF1-202ENST00000368020 SCN4AP35499 1836 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 PP2D1A8MPX8 630 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 KCNJ18B7U540 433 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 KLRC4O43908 158 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 EGFRP00533 1210 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 TECP42680 631 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 ICA1Q05084 483 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 AP3B2Q13367 1082 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 TNFAIP1Q13829 316 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 KCNJ12Q14500 433 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 SEPT2Q15019 361 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 KRT31Q15323 416 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 KRT79Q5XKE5 535 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 MOXD1Q6UVY6 613 aa15.71■□□□□ 0.1
USF1-202ENST00000368020 SRRTQ9BXP5 876 aaKnown RBP15.71■□□□□ 0.1
USF1-202ENST00000368020 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 PVALEFA0A1B0GWK0 134 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 IQCA1LA6NCM1 817 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
USF1-202ENST00000368020 TNNI2P48788 182 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 USP11P51784 963 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
USF1-202ENST00000368020 TBC1D10BQ4KMP7 808 aaPredicted RBP15.7■□□□□ 0.1
USF1-202ENST00000368020 SLFN13Q68D06 897 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 FAM151AQ8WW52 585 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 NT5C3AQ9H0P0 336 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 DNAJC18Q9H819 358 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 HACL1Q9UJ83 578 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 PPP2R2CQ9Y2T4 447 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 STK24Q9Y6E0 443 aa15.7■□□□□ 0.1
USF1-202ENST00000368020 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 TXKP42681 527 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 CACNB3P54284 484 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 ASIC1P78348 528 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 ABCB5Q2M3G0 1257 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
USF1-202ENST00000368020 FOXR2Q6PJQ5 311 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 ANKRD7Q92527 254 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 IQCDQ96DY2 449 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 ERO1AQ96HE7 468 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 L2HGDHQ9H9P8 463 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 TMEM260Q9NX78 707 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
USF1-202ENST00000368020 GDAQ9Y2T3 454 aa15.69■□□□□ 0.1
USF1-202ENST00000368020 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 DDTLA6NHG4 134 aaPredicted RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 MFAP3LO75121 409 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 CCDC175P0C221 793 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 FECHP22830 423 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 CCNE1P24864 410 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 PDE4DQ08499 809 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 TCP10Q12799 353 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 USP50Q70EL3 339 aaPredicted RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 KCTD1Q719H9 257 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 TEX33O43247 280 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 MARCH6O60337 910 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 SLU7O95391 586 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 FGFR1OPO95684 399 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 FOSP01100 380 aaPredicted RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 HIRAP54198 1017 aaPredicted RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 ADKP55263 362 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 PSMD2Q13200 908 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 SLFN12Q8IYM2 578 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 MMTAG2Q9BU76 263 aaKnown RBP15.68■□□□□ 0.1
USF1-202ENST00000368020 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 PCDHA1Q9Y5I3 950 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 PITPNM2Q9BZ72 1349 aa15.68■□□□□ 0.1
USF1-202ENST00000368020 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 PPP1R11O60927 126 aaPredicted RBP15.67■□□□□ 0.1
USF1-202ENST00000368020 RBL2Q08999 1139 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 CDC37Q16543 378 aaPredicted RBP15.67■□□□□ 0.1
USF1-202ENST00000368020 QRICH1Q2TAL8 776 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 TMTC1Q8IUR5 882 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 APOBEC3FQ8IUX4 373 aaKnown RBP15.67■□□□□ 0.1
USF1-202ENST00000368020 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 ZFPM1Q8IX07 1006 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 P2RX5Q93086 422 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 VEZTQ9HBM0 779 aa15.67■□□□□ 0.1
USF1-202ENST00000368020 CNTNAP1P78357 1384 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms