RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 GLT1D1Q96MS3 346 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 IWS1Q96ST2 819 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 WDR11Q9BZH6 1224 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 CTAGE5O15320 804 aa27.67■■■□□ 2.02
PFDN2-201ENST00000368010 DYNC1LI2O43237 492 aaPredicted RBP27.67■■■□□ 2.02
PFDN2-201ENST00000368010 ASGR1P07306 291 aa27.67■■■□□ 2.02
PFDN2-201ENST00000368010 TMTC3Q6ZXV5 915 aa27.67■■■□□ 2.02
PFDN2-201ENST00000368010 CMTR1Q8N1G2 835 aaKnown RBP27.67■■■□□ 2.02
PFDN2-201ENST00000368010 BRPF3Q9ULD4 1205 aa27.67■■■□□ 2.02
PFDN2-201ENST00000368010 GCOM1H8Y6P7 765 aaPredicted RBP27.66■■■□□ 2.02
PFDN2-201ENST00000368010 ZBTB43O43298 467 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 POLR2MP0CAP2 368 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 EIF2AK2P19525 551 aaKnown RBP27.66■■■□□ 2.02
PFDN2-201ENST00000368010 PSMA5P28066 241 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 BEX3Q00994 111 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 PPP2R5BQ15173 497 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 FSCN1Q16658 493 aaKnown RBP27.66■■■□□ 2.02
PFDN2-201ENST00000368010 TMEM63BQ5T3F8 832 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 SCFD2Q8WU76 684 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 PXMP2Q9NR77 195 aa27.66■■■□□ 2.02
PFDN2-201ENST00000368010 RBM28Q9NW13 759 aaKnown RBP27.66■■■□□ 2.02
PFDN2-201ENST00000368010 BAZ2BQ9UIF8 2168 aaKnown RBP27.66■■■□□ 2.02
PFDN2-201ENST00000368010 KLF18A0A0U1RQI7 1052 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 CPA1P15085 419 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 PTGS1P23219 599 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 HOXA13P31271 388 aaPredicted RBP27.65■■■□□ 2.02
PFDN2-201ENST00000368010 STXBP2Q15833 593 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 HABP4Q5JVS0 413 aaKnown RBP27.65■■■□□ 2.02
PFDN2-201ENST00000368010 PRKAG2Q9UGJ0 569 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 ELP1O95163 1332 aa27.65■■■□□ 2.02
PFDN2-201ENST00000368010 ZEB2O60315 1214 aa27.64■■■□□ 2.02
PFDN2-201ENST00000368010 RTN1Q16799 776 aa27.64■■■□□ 2.02
PFDN2-201ENST00000368010 NKRFO15226 690 aaKnown RBP eCLIP27.63■■■□□ 2.01
PFDN2-201ENST00000368010 RPS6KB1P23443 525 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 TTLL4Q14679 1199 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 Q6ZUG5 572 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 CCDC82Q8N4S0 544 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 USP26Q9BXU7 913 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 PRO3102Q9H379 93 aa27.63■■■□□ 2.01
PFDN2-201ENST00000368010 RBM27Q9P2N5 1060 aaKnown RBP27.63■■■□□ 2.01
PFDN2-201ENST00000368010 GOLGA8AA7E2F4 631 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 GOLGA8BA8MQT2 603 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 NR3C2P08235 984 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 TXNP10599 105 aaKnown RBP27.62■■■□□ 2.01
PFDN2-201ENST00000368010 RCAN1P53805 252 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 TLE2Q04725 743 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 VTI1AQ96AJ9 217 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 GDF15Q99988 308 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 PDCD2LQ9BRP1 358 aa27.62■■■□□ 2.01
PFDN2-201ENST00000368010 NAP1L2Q9ULW6 460 aaPredicted RBP27.62■■■□□ 2.01
PFDN2-201ENST00000368010 EIF3JO75822 258 aaKnown RBP27.61■■■□□ 2.01
PFDN2-201ENST00000368010 CASTP20810 708 aaKnown RBP27.61■■■□□ 2.01
PFDN2-201ENST00000368010 MAGEA10P43363 369 aaPredicted RBP27.61■■■□□ 2.01
PFDN2-201ENST00000368010 CXCL17Q6UXB2 119 aa27.61■■■□□ 2.01
PFDN2-201ENST00000368010 SEPT14Q6ZU15 432 aa27.61■■■□□ 2.01
PFDN2-201ENST00000368010 FCHSD1Q86WN1 690 aa27.61■■■□□ 2.01
PFDN2-201ENST00000368010 OR6J1Q8NGC5 347 aa27.61■■■□□ 2.01
PFDN2-201ENST00000368010 BRF1Q92994 677 aa27.61■■■□□ 2.01
PFDN2-201ENST00000368010 PRDM5Q9NQX1 630 aaPredicted RBP27.61■■■□□ 2.01
PFDN2-201ENST00000368010 PQBP1O60828 265 aaKnown RBP27.6■■■□□ 2.01
PFDN2-201ENST00000368010 CABYRO75952 493 aa27.6■■■□□ 2.01
PFDN2-201ENST00000368010 CUL5Q93034 780 aa27.6■■■□□ 2.01
PFDN2-201ENST00000368010 A0A0U1RQG5 324 aaPredicted RBP27.59■■■□□ 2.01
PFDN2-201ENST00000368010 hCG_1642624A0A1W2PR95 340 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 CPT1AP50416 773 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 APOBRQ0VD83 1088 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 FBXL16Q8N461 479 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 LBHD1Q9BQE6 289 aaPredicted RBP27.59■■■□□ 2.01
PFDN2-201ENST00000368010 PDLIM7Q9NR12 457 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 CNTNAP5Q8WYK1 1306 aa27.59■■■□□ 2.01
PFDN2-201ENST00000368010 ARIH2O95376 493 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 CLTBP09497 229 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 MYCLP12524 364 aaPredicted RBP27.58■■■□□ 2.01
PFDN2-201ENST00000368010 BMP8BP34820 402 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 PGM5Q15124 567 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 BRDTQ58F21 947 aaPredicted RBP27.58■■■□□ 2.01
PFDN2-201ENST00000368010 CCDC62Q6P9F0 684 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 ANKRD33Q7Z3H0 272 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 SMARCC2Q8TAQ2 1214 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 TOX2Q96NM4 488 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 MROH7Q68CQ1 1323 aa27.58■■■□□ 2.01
PFDN2-201ENST00000368010 A0A1W2PPC1 479 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 DCDC2CA8MYV0 355 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 CCND2P30279 289 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 METAP2P50579 478 aaKnown RBP eCLIP27.57■■■□□ 2
PFDN2-201ENST00000368010 HEATR3Q7Z4Q2 680 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 VSIG10LQ86VR7 867 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 COPS5Q92905 334 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 AGXT2Q9BYV1 514 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 POLR3EQ9NVU0 708 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 PCDH10Q9P2E7 1040 aa27.57■■■□□ 2
PFDN2-201ENST00000368010 CCDC196A0A1B0GTZ2 297 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 ARVCFO00192 962 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 PIK3CDO00329 1044 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 MDM2Q00987 491 aaPredicted RBP27.56■■■□□ 2
PFDN2-201ENST00000368010 RUFY3Q7L099 469 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 IL31RAQ8NI17 732 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 ZSWIM6Q9HCJ5 1215 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 MRVI1Q9Y6F6 885 aa27.56■■■□□ 2
PFDN2-201ENST00000368010 GH1P01241 217 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms