RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 EP400NLQ6ZTU2 488 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 LRRC8DQ7L1W4 858 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 RNF135Q8IUD6 432 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.4
VAMP4-202ENST00000367740 CCDC155Q8N6L0 562 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 DHX38Q92620 1227 aaKnown RBP17.52■□□□□ 0.4
VAMP4-202ENST00000367740 EDAQ92838 391 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 ARPP21Q9UBL0 812 aaPredicted RBP17.52■□□□□ 0.4
VAMP4-202ENST00000367740 SLC4A4Q9Y6R1 1079 aa17.52■□□□□ 0.4
VAMP4-202ENST00000367740 RBM47A0AV96 593 aaKnown RBP17.51■□□□□ 0.39
VAMP4-202ENST00000367740 BMP3P12645 472 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 LTBRP36941 435 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 STAT2P52630 851 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 SMAD2Q15796 467 aaKnown RBP17.51■□□□□ 0.39
VAMP4-202ENST00000367740 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
VAMP4-202ENST00000367740 STK11IPQ8N1F8 1099 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 MKL1Q969V6 931 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 POP1Q99575 1024 aaKnown RBP17.51■□□□□ 0.39
VAMP4-202ENST00000367740 CLDND1Q9NY35 253 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 MYO7AQ13402 2215 aa17.51■□□□□ 0.39
VAMP4-202ENST00000367740 TMEM221A6NGB7 291 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 M0R296 226 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
VAMP4-202ENST00000367740 RBL2Q08999 1139 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 EPC2Q52LR7 807 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 PBXIP1Q96AQ6 731 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 CEP95Q96GE4 821 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 INSL6Q9Y581 213 aa17.5■□□□□ 0.39
VAMP4-202ENST00000367740 RAD50Q92878 1312 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 A6NJR5 290 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 EFCAB14O75071 495 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 ALDH5A1P51649 535 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 HTRA4P83105 476 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 BRDTQ58F21 947 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 GDF6Q6KF10 455 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 NSMFQ6X4W1 530 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 TRIM67Q6ZTA4 783 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 RPAINQ86UA6 219 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
VAMP4-202ENST00000367740 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
VAMP4-202ENST00000367740 H3BNC9 293 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 MBTPS2O43462 519 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 KPNA6O60684 536 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 PARNO95453 639 aaKnown RBP17.48■□□□□ 0.39
VAMP4-202ENST00000367740 CLUL1Q15846 466 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 PKN1Q16512 942 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.39
VAMP4-202ENST00000367740 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
VAMP4-202ENST00000367740 COPS5Q92905 334 aa17.48■□□□□ 0.39
VAMP4-202ENST00000367740 CKBP12277 381 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 SNAP25P60880 206 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 MKRN4PQ13434 485 aaPredicted RBP17.47■□□□□ 0.39
VAMP4-202ENST00000367740 GPM6BQ13491 265 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 IKBKEQ14164 716 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 CTC1Q2NKJ3 1217 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 SBK1Q52WX2 424 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 SAMD11Q96NU1 681 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
VAMP4-202ENST00000367740 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
VAMP4-202ENST00000367740 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
VAMP4-202ENST00000367740 TTLL1O95922 423 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 DLX2Q07687 328 aaPredicted RBP17.46■□□□□ 0.39
VAMP4-202ENST00000367740 IKQ13123 557 aaPredicted RBP17.46■□□□□ 0.39
VAMP4-202ENST00000367740 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 TRAF7Q6Q0C0 670 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 FBXL6Q8N531 539 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 CHURC1Q8WUH1 139 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 STAG1Q8WVM7 1258 aa17.46■□□□□ 0.39
VAMP4-202ENST00000367740 PUS7LQ9H0K6 701 aaKnown RBP17.46■□□□□ 0.39
VAMP4-202ENST00000367740 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
VAMP4-202ENST00000367740 PTPRZ1P23471 2315 aaPredicted RBP17.46■□□□□ 0.38
VAMP4-202ENST00000367740 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
VAMP4-202ENST00000367740 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
VAMP4-202ENST00000367740 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
VAMP4-202ENST00000367740 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
VAMP4-202ENST00000367740 GMCL1Q96IK5 515 aa17.45■□□□□ 0.38
VAMP4-202ENST00000367740 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.45■□□□□ 0.38
VAMP4-202ENST00000367740 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 STXBP3O00186 592 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 PRDM1O75626 825 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
VAMP4-202ENST00000367740 SMAD4Q13485 552 aaKnown RBP17.44■□□□□ 0.38
VAMP4-202ENST00000367740 BAATQ14032 418 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-202ENST00000367740 FBXO11Q86XK2 927 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 MYOCDQ8IZQ8 938 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms