RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 ADALQ6DHV7 355 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 ERO1BQ86YB8 467 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 REXO1Q8N1G1 1221 aaKnown RBP10.84□□□□□ -0.67
VTA1-201ENST00000367621 ENGASEQ8NFI3 743 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
VTA1-201ENST00000367621 BICD2Q8TD16 824 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 WNK4Q96J92 1243 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 AGBL1Q96MI9 1066 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 CLIC6Q96NY7 704 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 CSADQ9Y600 493 aa10.84□□□□□ -0.67
VTA1-201ENST00000367621 A0A0G2JLL6 359 aaPredicted RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 VWA5AO00534 786 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 FLOT1O75955 427 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 ICAM1P05362 532 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 MLLT3P42568 568 aaPredicted RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 ME1P48163 572 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 MRPL12P52815 198 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 PPIL2Q13356 520 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 SNW1Q13573 536 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
VTA1-201ENST00000367621 IL17AQ16552 155 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 USH1GQ495M9 461 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 TREML2Q5T2D2 321 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 CAVIN1Q6NZI2 390 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 SHC4Q6S5L8 630 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 ARMC9Q7Z3E5 817 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 PRRT2Q7Z6L0 340 aaPredicted RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 TBCKQ8TEA7 893 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 CRYGNQ8WXF5 182 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 CLEC4DQ8WXI8 215 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 CUL5Q93034 780 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 ATG4CQ96DT6 458 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 GZF1Q9H116 711 aaPredicted RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 NOL7Q9UMY1 257 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
VTA1-201ENST00000367621 DOCK1Q14185 1865 aa10.83□□□□□ -0.68
VTA1-201ENST00000367621 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 CUTAO60888 179 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 NR1I2O75469 434 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 CMA1P23946 247 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
VTA1-201ENST00000367621 GHRHRQ02643 423 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
VTA1-201ENST00000367621 CST9Q5W186 159 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 RESP18Q5W5W9 173 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 FMR1NBQ8N0W7 255 aaPredicted RBP10.82□□□□□ -0.68
VTA1-201ENST00000367621 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
VTA1-201ENST00000367621 HPSEQ9Y251 543 aa10.82□□□□□ -0.68
VTA1-201ENST00000367621 POLR2AP24928 1970 aaKnown RBP10.82□□□□□ -0.68
VTA1-201ENST00000367621 ATP2A1O14983 1001 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 BMP15O95972 392 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 HOXA7P31268 230 aaPredicted RBP10.81□□□□□ -0.68
VTA1-201ENST00000367621 MCM7P33993 719 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 FKBP1BP68106 108 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 PTGDRQ13258 359 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 COG2Q14746 738 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 ZSCAN23Q3MJ62 389 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 GPAT2Q6NUI2 795 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 NEK8Q86SG6 692 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 TEX2Q8IWB9 1127 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 KRI1Q8N9T8 703 aaKnown RBP10.81□□□□□ -0.68
VTA1-201ENST00000367621 FSIP1Q8NA03 581 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 OPTNQ96CV9 577 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 DACT1Q9NYF0 836 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 TMOD4Q9NZQ9 345 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 CEP131Q9UPN4 1083 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
VTA1-201ENST00000367621 PHIPQ8WWQ0 1821 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 ABCB11O95342 1321 aa10.81□□□□□ -0.68
VTA1-201ENST00000367621 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 A0A1B0GVL5 298 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 GOLGA6L4A6NEF3 574 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
VTA1-201ENST00000367621 ZBED4O75132 1171 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 CELF2O95319 508 aaKnown RBP10.8□□□□□ -0.68
VTA1-201ENST00000367621 FDX1P10109 184 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 CYP3A7P24462 503 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
VTA1-201ENST00000367621 HSD17B4P51659 736 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 NDUFA8P51970 172 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 TRAF1Q13077 416 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 AP3B2Q13367 1082 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 TMEM132BQ14DG7 1078 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 LETM2Q2VYF4 491 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 MUM1L1Q5H9M0 696 aa10.8□□□□□ -0.68
VTA1-201ENST00000367621 USP49Q70CQ1 688 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms