RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ROPN1Q9HAT0 212 aaPredicted RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 ATP6V0A2Q9Y487 856 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 PLCH2O75038 1416 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 MAFGO15525 162 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 CYP2C19P33261 490 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 RXRGP48443 463 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 C9orf78Q9NZ63 289 aaPredicted RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 GSTTP1A0A1W2PQM5 241 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 CMA1P23946 247 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 NGDNQ8NEJ9 315 aaKnown RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 NR1H4Q96RI1 486 aaPredicted RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 CEP44Q9C0F1 390 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 PDS5AQ29RF7 1337 aaKnown RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 TCP11L2Q8N4U5 519 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 ATP7BP35670 1465 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 SNAP47Q5SQN1 464 aa4.09□□□□□ -1.75
SYNE1-207ENST00000367255 PNMA8AQ86V59 439 aaPredicted RBP4.09□□□□□ -1.75
SYNE1-207ENST00000367255 RASSF10A6NK89 507 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 PCYT1AP49585 367 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 JADE3Q92613 823 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 RASA4BC9J798 803 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 RASA4O43374 803 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 SEMA3DO95025 777 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ANXA1P04083 346 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 GET4Q7L5D6 327 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 CPLX4Q7Z7G2 160 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 OR8K1Q8NGG5 319 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 UVRAGQ9P2Y5 699 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 AARSP49588 968 aaKnown RBP eCLIP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 AASDHQ4L235 1098 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 C1orf141Q5JVX7 400 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 BCL7BQ9BQE9 202 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 PACSIN2Q9UNF0 486 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 PALM3A6NDB9 673 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ITIH4Q14624 930 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ANKRD7Q92527 254 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 TNFRSF8P28908 595 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 GEN1Q17RS7 908 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 PLA2G4EQ3MJ16 856 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 SCFD2Q8WU76 684 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 CCDC8Q9H0W5 538 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF451Q9Y4E5 1061 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ACTL7BQ9Y614 415 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ZC3H4Q9UPT8 1303 aaKnown RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF12P17014 697 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 BZW1Q7L1Q6 419 aaKnown RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 DGCR14Q96DF8 476 aaKnown RBP4.09□□□□□ -1.76
SYNE1-207ENST00000367255 CSRNP1Q96S65 589 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 EXOC7Q9UPT5 735 aa4.09□□□□□ -1.76
SYNE1-207ENST00000367255 IRS2Q9Y4H2 1338 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GCFC2P16383 781 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PTF1AQ7RTS3 328 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PHKBQ93100 1093 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MUC13Q9H3R2 512 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CC2D2AQ9P2K1 1620 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SH3TC1Q8TE82 1336 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 BAG1Q99933 345 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 COMMD3-BMI1R4GMX3 469 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SAMD9LQ8IVG5 1584 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PRIM2P49643 509 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 AKNAD1Q5T1N1 836 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SNX30Q5VWJ9 437 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 GSPT2Q8IYD1 628 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MICAL1Q8TDZ2 1067 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DBF4Q9UBU7 674 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 H2AFYO75367 372 aaKnown RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PPP2R1AP30153 589 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TYRO3Q06418 890 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MAPK11Q15759 364 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 NT5C3AQ9H0P0 336 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 RWDD3Q9Y3V2 267 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 NOS1P29475 1434 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 WDHD1O75717 1129 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KRT8P05787 483 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 DNAJB2P25686 324 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ANGPT1Q15389 498 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 TAB1Q15750 504 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CEP85Q6P2H3 762 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CCNJLQ8IV13 435 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SH3GLB2Q9NR46 395 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF711Q9Y462 761 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 H3BQF6 201 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ENOSF1Q7L5Y1 443 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CARD6Q9BX69 1037 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 KRT72Q14CN4 511 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ADALQ6DHV7 355 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 NACA2Q9H009 215 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 MYBL1P10243 752 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 STRN3Q13033 797 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 RNF216Q9NWF9 866 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 CUTAO60888 179 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 PCNAP12004 261 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 UBASH3AP57075 661 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 AKR1B15C9JRZ8 316 aaPredicted RBP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 WDR93Q6P2C0 686 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 AGGF1Q8N302 714 aaeCLIP4.08□□□□□ -1.76
SYNE1-207ENST00000367255 SNX29Q8TEQ0 813 aa4.08□□□□□ -1.76
SYNE1-207ENST00000367255 ZNF274Q96GC6 653 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms