RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 NSMFQ6X4W1 530 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 ARMC9Q7Z3E5 817 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 CPXCR1Q8N123 301 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 PAGE5Q96GU1 130 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 LMNB2Q03252 620 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 LRRC63Q05C16 580 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 EXOC3L4Q17RC7 722 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 CEP85LQ5SZL2 805 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 I3L4J1 428 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 PDE6CP51160 858 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 TSTA3Q13630 321 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 CERKLQ49MI3 558 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 PRR16Q569H4 304 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 TTC30AQ86WT1 665 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 DGKHQ86XP1 1220 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 EXOC4Q96A65 974 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 NCAPGQ9BPX3 1015 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 SLC39A2Q9NP94 309 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 LMCD1Q9NZU5 365 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 THRAP3Q9Y2W1 955 aaKnown RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 JRKLQ9Y4A0 524 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 ZC3H13Q5T200 1668 aaKnown RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 TTLL1O95922 423 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 FKBP3Q00688 224 aaKnown RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 DLGAP5Q15398 846 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 MICAL1Q8TDZ2 1067 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 FNDC3AQ9Y2H6 1198 aaKnown RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 IQGAP1P46940 1657 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 CYP2E1P05181 493 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 GTF2IP78347 998 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 NEDD9Q14511 834 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 ALS2CLQ60I27 953 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 FAM178BQ8IXR5 827 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.85□□□□□ -0.83
SYNE1-205ENST00000367251 TRIM31Q9BZY9 425 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
SYNE1-205ENST00000367251 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 ARHGEF40Q8TER5 1519 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 AFPP02771 609 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 PTPREP23469 700 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 VSIG1Q86XK7 387 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 EPSTI1Q96J88 318 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 CCDC160A6NGH7 325 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 MUM1L1Q5H9M0 696 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 SLFN13Q68D06 897 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 CLEC4GQ6UXB4 293 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 LCORLQ8N3X6 602 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 DCPSQ96C86 337 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 CHAMP1Q96JM3 812 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 STRBPQ96SI9 672 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 SPZ1Q9BXG8 430 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 BCAP29Q9UHQ4 241 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 NEXMIFQ5QGS0 1516 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 THAP12O43422 761 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 BUB1BO60566 1050 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 PSMC2P35998 433 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 ALCAMQ13740 583 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 ARHGAP44Q17R89 818 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 GKAP1Q5VSY0 366 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 PPP4R4Q6NUP7 873 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 C1orf228Q6PIY5 440 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 C1orf112Q9NSG2 853 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 BSDC1Q9NW68 430 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 DIS3Q9Y2L1 958 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 PLEKHG2Q9H7P9 1386 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 CRB1P82279 1406 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 TROVE2P10155 538 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 MFAP3P55082 362 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 GLE1Q53GS7 698 aaKnown RBP9.84□□□□□ -0.83
SYNE1-205ENST00000367251 CHMP6Q96FZ7 201 aa9.84□□□□□ -0.83
SYNE1-205ENST00000367251 NOL3O60936 208 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 BBOX1O75936 387 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 ICA1Q05084 483 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 HADHQ16836 314 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 ELMSAN1Q6PJG2 1045 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 WDR11Q9BZH6 1224 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 DTNBO60941 627 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 SERPING1P05155 500 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 TCP11X2Q5H9J9 407 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 TTLL11Q8NHH1 800 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 GANCQ8TET4 914 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 PSMB7Q99436 277 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 FRMPD2Q68DX3 1309 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-205ENST00000367251 K7ENM7 598 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 MFAP3LO75121 409 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 IGKV5-2P06315 115 aa9.83□□□□□ -0.84
SYNE1-205ENST00000367251 SLC8A1P32418 973 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms