RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 IKBKGQ9Y6K9 419 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 LGR5O75473 907 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 SERPINB4P48594 390 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
PRKN-206ENST00000366898 TRIM74Q86UV6 250 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 TRIM73Q86UV7 250 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
PRKN-206ENST00000366898 TSG101Q99816 390 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 LZTS1Q9Y250 596 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 CYP2D7A0A087X1C5 515 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 CIAO1O76071 339 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
PRKN-206ENST00000366898 ESR2Q92731 530 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 TSC22D4Q9Y3Q8 395 aa12.84□□□□□ -0.35
PRKN-206ENST00000366898 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.35
PRKN-206ENST00000366898 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
PRKN-206ENST00000366898 SMTNP53814 917 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 TBC1D10CQ8IV04 446 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRKN-206ENST00000366898 CUL5Q93034 780 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 HIC2Q96JB3 615 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 CYTH2Q99418 400 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 GPR108Q9NPR9 543 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
PRKN-206ENST00000366898 UBAP1Q9NZ09 502 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 CHMP2BQ9UQN3 213 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 TCP1P17987 556 aaKnown RBP12.83□□□□□ -0.36
PRKN-206ENST00000366898 LSP1P33241 339 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 KLHL23Q8NBE8 558 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 STAMBPL1Q96FJ0 436 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 SERTAD1Q9UHV2 236 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 KRT14P02533 472 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 STAT6P42226 847 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 KLC1Q07866 573 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 SUSD4Q5VX71 490 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
PRKN-206ENST00000366898 RMND1Q9NWS8 449 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 VPS54Q9P1Q0 977 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 L1RE1Q9UN81 338 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 L3MBTL1Q9Y468 752 aa12.83□□□□□ -0.36
PRKN-206ENST00000366898 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
PRKN-206ENST00000366898 ARHGAP42A6NI28 874 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 ADD2P35612 726 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
PRKN-206ENST00000366898 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
PRKN-206ENST00000366898 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 TRIM14Q14142 442 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
PRKN-206ENST00000366898 LRRIQ3A6PVS8 624 aaPredicted RBP12.82□□□□□ -0.36
PRKN-206ENST00000366898 KCNK3O14649 394 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 STAMBPO95630 424 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 ZNF174Q15697 407 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 LCA5Q86VQ0 697 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 FAM207AQ9NSI2 230 aaPredicted RBP12.82□□□□□ -0.36
PRKN-206ENST00000366898 ATP8A1Q9Y2Q0 1164 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 TRIM75PA6NK02 468 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 TRPA1O75762 1119 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 USP4Q13107 963 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 NAA35Q5VZE5 725 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 CYB5R4Q7L1T6 521 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 TRIM42Q8IWZ5 723 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 KIF2BQ8N4N8 673 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 CENPKQ9BS16 269 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 EPN3Q9H201 632 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
PRKN-206ENST00000366898 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
PRKN-206ENST00000366898 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRKN-206ENST00000366898 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 FERP16591 822 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 USP14P54578 494 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 RPS6KA1Q15418 735 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 HSP90AA5PQ58FG0 334 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 NUGGCQ68CJ6 796 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 MTRQ99707 1265 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 MCM8Q9UJA3 840 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 PHF20L1A8MW92 1017 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 RCN2Q14257 317 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 IQCB1Q15051 598 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 FYB2Q5VWT5 728 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms