RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MAGEF1Q9HAY2 307 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 DISC1Q9NRI5 854 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 SBF1O95248 1867 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 CPP00450 1065 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 STAT6P42226 847 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 IRF2BP1Q8IU81 584 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 AFAP1L1Q8TED9 768 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
PRKN-204ENST00000366896 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 CCSER1Q9C0I3 900 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 THAP9Q9H5L6 903 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 RAD17O75943 681 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 PMS1P54277 932 aaKnown RBP16.41■□□□□ 0.22
PRKN-204ENST00000366896 GSTO1P78417 241 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 CCDC148Q8NFR7 591 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 DNAJC7Q99615 494 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 CUEDC2Q9H467 287 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
PRKN-204ENST00000366896 KRT9P35527 623 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 PRPHP41219 470 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 NAALADL2Q58DX5 795 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 EFCAB13Q8IY85 973 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 CHP1Q99653 195 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
PRKN-204ENST00000366896 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 PSMD14O00487 310 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 GUCY2CP25092 1073 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 USP14P54578 494 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 UBXN1Q04323 297 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 ZNF507Q8TCN5 953 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 PLIN2Q99541 437 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 HAUS4Q9H6D7 363 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 TRIM10Q9UDY6 481 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 ROBO3Q96MS0 1386 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 RHOBTB3O94955 611 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 VIL1P09327 827 aaKnown RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 TFAP4Q01664 338 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 CXCL9Q07325 125 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 HPCAL4Q9UM19 191 aa16.4■□□□□ 0.22
PRKN-204ENST00000366896 EPN1Q9Y6I3 576 aaPredicted RBP16.4■□□□□ 0.22
PRKN-204ENST00000366896 LMNB1P20700 586 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 MCM3P25205 808 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 PPP1R2P41236 205 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 STIM1Q13586 685 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 GRM4Q14833 912 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
PRKN-204ENST00000366896 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 KBTBD4Q9NVX7 518 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 GEMIN8Q9NWZ8 242 aaKnown RBP16.39■□□□□ 0.21
PRKN-204ENST00000366896 CAPN11Q9UMQ6 739 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 NDUFA10O95299 355 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 LDHCP07864 332 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 MAP9Q49MG5 647 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 DNAJC21Q5F1R6 531 aaKnown RBP16.39■□□□□ 0.21
PRKN-204ENST00000366896 RETREG2Q8NC44 543 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 GIMAP8Q8ND71 665 aaPredicted RBP16.39■□□□□ 0.21
PRKN-204ENST00000366896 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
PRKN-204ENST00000366896 MTMR7Q9Y216 660 aa16.39■□□□□ 0.21
PRKN-204ENST00000366896 GAKO14976 1311 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 ANKRD65E5RJM6 399 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 FZD9O00144 591 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 KLRC4O43908 158 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 MEA1Q16626 185 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 SLF2Q8IX21 1173 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 DHTKD1Q96HY7 919 aaPredicted RBP16.38■□□□□ 0.21
PRKN-204ENST00000366896 AK8Q96MA6 479 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 PLEKHA4Q9H4M7 779 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 MYO3BQ8WXR4 1341 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 DNM2P50570 870 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 INF2Q27J81 1249 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 NUP58Q9BVL2 599 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
PRKN-204ENST00000366896 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
PRKN-204ENST00000366896 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms