RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 A6NJR5 290 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 B4DLN1 442 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MRPL12P52815 198 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SMAD3P84022 425 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PURAQ00577 322 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 COL9A3Q14050 684 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CHST3Q7LGC8 479 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RALYLQ86SE5 291 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SAMD3Q8N6K7 520 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 COPS5Q92905 334 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 IWS1Q96ST2 819 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MTA3Q9BTC8 594 aa15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MAP3K20Q9NYL2 800 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CPT1AP50416 773 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PSMC6P62333 389 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 WTAPQ15007 396 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 NECTIN1Q15223 517 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 BMP2KLQ5H9B9 411 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CENPQQ7L2Z9 268 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SKAP1Q86WV1 359 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RMDN3Q96TC7 470 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MAP3K14Q99558 947 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 LY9Q9HBG7 655 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SCN10AQ9Y5Y9 1956 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ERICH2A1L162 156 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 DHX16O60231 1041 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 B4GALT4O60513 344 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RASIP1Q5U651 963 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PIGSQ96S52 555 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■■■■□ 19.4
TNFRSF1A-202ENST00000366159 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PXMP2Q9NR77 195 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PCDHA1Q9Y5I3 950 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
TNFRSF1A-202ENST00000366159 A0A0C4DFX4 3053 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 UMODL1Q5DID0 1318 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CFBP00751 764 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CSF2RAP15509 400 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TTLL4Q14679 1199 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 STXBP2Q15833 593 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TMEM67Q5HYA8 995 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 VWCEQ96DN2 955 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 GUCD1Q96NT3 240 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 STXBP5LQ9Y2K9 1186 aa15.89■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CHD9Q3L8U1 2897 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SLC27A2O14975 620 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 EIF3JO75822 258 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 RGS20O76081 388 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 NR3C2P08235 984 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CYP2C18P33260 490 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ARHGAP1Q07960 439 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PPIGQ13427 754 aaKnown RBP eCLIP15.88■□□□□ 0.138e-8■■■■□ 26.7
TNFRSF1A-202ENST00000366159 TMEM199Q8N511 208 aa15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 MTG1Q9BT17 334 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 NOC4LQ9BVI4 516 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-202ENST00000366159 BAZ2BQ9UIF8 2168 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PRC1O43663 620 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 KPNA6O60684 536 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 MYL3P08590 195 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 EIF2AK2P19525 551 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 LY6KQ17RY6 165 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ARHGEF16Q5VV41 709 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CREB3L3Q68CJ9 461 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 CATIPQ7Z7H3 387 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 EMID1Q96A84 441 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PDCD2LQ9BRP1 358 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 PPP1R12CQ9BZL4 782 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 WNT8AQ9H1J5 351 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TTYH1Q9H313 450 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HIPK3Q9H422 1215 aa15.87■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 DDAH1O94760 285 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 MCM5P33992 734 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 LIFRP42702 1097 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TRAF1Q13077 416 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 BRDTQ58F21 947 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 SEPT14Q6ZU15 432 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 ZNF654Q8IZM8 581 aa15.86■□□□□ 0.13
TNFRSF1A-202ENST00000366159 TMEM87BQ96K49 555 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms