RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TRIM37O94972 964 aa18.03■□□□□ 0.48
IFT140-201ENST00000361339 OR52Z1P0C646 297 aa18.03■□□□□ 0.48
IFT140-201ENST00000361339 MMS22LQ6ZRQ5 1243 aa18.03■□□□□ 0.48
IFT140-201ENST00000361339 POTEMA6NI47 508 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 LRRC10BA6NIK2 292 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 PDHBP11177 359 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 ATP2B4P23634 1241 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
IFT140-201ENST00000361339 ZFPM1Q8IX07 1006 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 EFCAB13Q8IY85 973 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 DAGLBQ8NCG7 672 aa18.02■□□□□ 0.48
IFT140-201ENST00000361339 DUSP9Q99956 384 aaKnown RBP18.02■□□□□ 0.48
IFT140-201ENST00000361339 AFF2P51816 1311 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 RAD21O60216 631 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 MCTP2Q6DN12 878 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 GLIS3Q8NEA6 775 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.47
IFT140-201ENST00000361339 SPZ1Q9BXG8 430 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 MYO6Q9UM54 1294 aa18.02■□□□□ 0.47
IFT140-201ENST00000361339 REXO2Q9Y3B8 237 aaKnown RBP18.02■□□□□ 0.47
IFT140-201ENST00000361339 PPP1R11O60927 126 aaPredicted RBP18.01■□□□□ 0.47
IFT140-201ENST00000361339 CT47A1Q5JQC4 288 aaPredicted RBP18.01■□□□□ 0.47
IFT140-201ENST00000361339 RBM17Q96I25 401 aaKnown RBP18.01■□□□□ 0.47
IFT140-201ENST00000361339 CRACR2AQ9BSW2 395 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 ASIC1P78348 528 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 PDE4DQ08499 809 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 ANKRD40Q6AI12 368 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 DYMQ7RTS9 669 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
IFT140-201ENST00000361339 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 GBP3Q9H0R5 595 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 SLC39A2Q9NP94 309 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 AGPAT5Q9NUQ2 364 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 THSD7AQ9UPZ6 1657 aa18.01■□□□□ 0.47
IFT140-201ENST00000361339 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
IFT140-201ENST00000361339 TAL1P17542 331 aaPredicted RBP18■□□□□ 0.47
IFT140-201ENST00000361339 ARHGAP25P42331 645 aa18■□□□□ 0.47
IFT140-201ENST00000361339 NFIAQ12857 509 aa18■□□□□ 0.47
IFT140-201ENST00000361339 STIM1Q13586 685 aa18■□□□□ 0.47
IFT140-201ENST00000361339 TTI2Q6NXR4 508 aa18■□□□□ 0.47
IFT140-201ENST00000361339 NEK8Q86SG6 692 aa18■□□□□ 0.47
IFT140-201ENST00000361339 BCAS4Q8TDM0 211 aa18■□□□□ 0.47
IFT140-201ENST00000361339 TRIM9Q9C026 710 aa18■□□□□ 0.47
IFT140-201ENST00000361339 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
IFT140-201ENST00000361339 FAM169AQ9Y6X4 670 aa18■□□□□ 0.47
IFT140-201ENST00000361339 A0A087WUV0 522 aaPredicted RBP18■□□□□ 0.47
IFT140-201ENST00000361339 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
IFT140-201ENST00000361339 RMND1Q9NWS8 449 aa18■□□□□ 0.47
IFT140-201ENST00000361339 LY75O60449 1722 aa18■□□□□ 0.47
IFT140-201ENST00000361339 RASSF10A6NK89 507 aa18■□□□□ 0.47
IFT140-201ENST00000361339 H0YHG0 523 aa18■□□□□ 0.47
IFT140-201ENST00000361339 C15orf52Q6ZUT6 534 aaKnown RBP18■□□□□ 0.47
IFT140-201ENST00000361339 KCTD1Q719H9 257 aa18■□□□□ 0.47
IFT140-201ENST00000361339 KCNK18Q7Z418 384 aa18■□□□□ 0.47
IFT140-201ENST00000361339 CNGA4Q8IV77 575 aa18■□□□□ 0.47
IFT140-201ENST00000361339 MB21D1Q8N884 522 aa18■□□□□ 0.47
IFT140-201ENST00000361339 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
IFT140-201ENST00000361339 MMS19Q96T76 1030 aa18■□□□□ 0.47
IFT140-201ENST00000361339 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
IFT140-201ENST00000361339 RPS6KA5O75582 802 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 MYBL2P10244 700 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 MATR3P43243 847 aaKnown RBP eCLIP17.99■□□□□ 0.47
IFT140-201ENST00000361339 SOGA3Q5TF21 947 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
IFT140-201ENST00000361339 KIAA0895Q8NCT3 520 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 CAGE1Q8TC20 777 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 CXorf56Q9H5V9 222 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 C6orf50Q9HD87 102 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 GAKO14976 1311 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 ADAMTSL1Q8N6G6 1762 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 EBAG9O00559 213 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 RHOBTB3O94955 611 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 CCDC91Q7Z6B0 441 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 PROM2Q8N271 834 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 ANKRD20A12PQ8NF67 263 aa17.99■□□□□ 0.47
IFT140-201ENST00000361339 TTF2Q9UNY4 1162 aaKnown RBP17.99■□□□□ 0.47
IFT140-201ENST00000361339 HNRNPH1P31943 449 aaKnown RBP17.98■□□□□ 0.47
IFT140-201ENST00000361339 MAP2K2P36507 400 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 TNNI2P48788 182 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 WDR59Q6PJI9 974 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 MED4Q9NPJ6 270 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
IFT140-201ENST00000361339 HPCAL4Q9UM19 191 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 ITIH6Q6UXX5 1313 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 MYH1P12882 1939 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 GRB10Q13322 594 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 ECM1Q16610 540 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 KRT25Q7Z3Z0 450 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 ZNF507Q8TCN5 953 aa17.98■□□□□ 0.47
IFT140-201ENST00000361339 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
IFT140-201ENST00000361339 GOLGA6CA6NDK9 693 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 MPHOSPH10O00566 681 aaKnown RBP17.97■□□□□ 0.47
IFT140-201ENST00000361339 ZNF185O15231 689 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 GOLGA6DP0CG33 693 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 SNAP25P60880 206 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 TCP10Q12799 353 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 LRRC41Q15345 812 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 PNMA5Q96PV4 448 aa17.97■□□□□ 0.47
IFT140-201ENST00000361339 BLOC1S4Q9NUP1 217 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms